About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s002.g0510.t1
Lsat_s002.g0511.t1DPY-19-LIKE 1, LIKE (H. SAPIENS)
Lsat_s002.g0512.t1FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEIN
Lsat_s002.g0513.t1MIXED LINEAGE PROTEIN KINASE
Lsat_s002.g0514.t1D-ALANYL-D-ALANINE-CARBOXYPEPTIDASE/ENDOPEPTIDASE AMPH
Lsat_s002.g0515.t1
Lsat_s002.g0516.t1DNA-DIRECTED RNA POLYMERASE SUBUNIT K
Lsat_s002.g0517.t1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED
Lsat_s002.g0518.t1DIACYLGLYCEROL KINASE
Lsat_s002.g0519.t1
Lsat_s002.g0520.t1
Lsat_s002.g0521.t1
Lsat_s002.g0522.t1
Lsat_s002.g0523.t1
Lsat_s002.g0524.t1CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATED
Lsat_s002.g0525.t1
Lsat_s002.g0526.t1SPHINGOMYELINASE FAMILY MEMBER
Lsat_s002.g0527.t1RABIN3-RELATED
Lsat_s002.g0528.t1BLR2807 PROTEIN
Lsat_s002.g0529.t1
Lsat_s002.g0530.t1PEPTIDASE M20
Lsat_s002.g0531.t1PEPTIDASE M20
Lsat_s002.g0532.t1UNCHARACTERIZED
Lsat_s002.g0533.t1NEUROGENIC PROTEIN MASTERMIND
Lsat_s002.g0534.t1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Lsat_s002.g0535.t1
Lsat_s002.g0536.t1
Lsat_s002.g0537.t1BLR2807 PROTEIN
Lsat_s002.g0538.t1
Lsat_s002.g0539.t1SHIPPO-1-RELATED
Lsat_s002.g0540.t1
Lsat_s002.g0541.t1
Lsat_s002.g0542.t1
Lsat_s002.g0543.t1
Lsat_s002.g0544.t1
Lsat_s002.g0545.t1
Lsat_s002.g0546.t1
Lsat_s002.g0547.t1
Lsat_s002.g0548.t1
Lsat_s002.g0549.t1PROTEASOME SUBUNIT ALPHA/BETA
Lsat_s002.g0550.t1POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1
Lsat_s002.g0551.t1POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1
Lsat_s002.g0552.t1
Lsat_s002.g0553.t1
Lsat_s002.g0554.t1POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1
Lsat_s002.g0555.t1
Lsat_s002.g0556.t1POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1
Lsat_s002.g0557.t1POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1
Lsat_s002.g0558.t1
Lsat_s002.g0559.t1RAN BINDING PROTEIN 9-RELATED
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