About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s002.g0210.t1EIF-1A
Lsat_s002.g0211.t1
Lsat_s002.g0212.t1TOLL-LIKE RECEPTOR
Lsat_s002.g0213.t1
Lsat_s002.g0214.t1
Lsat_s002.g0215.t1
Lsat_s002.g0216.t1
Lsat_s002.g0217.t1
Lsat_s002.g0218.t1BETA-1,4-GALACTOSYLTRANSFERASE
Lsat_s002.g0219.t1
Lsat_s002.g0220.t1
Lsat_s002.g0221.t1
Lsat_s002.g0222.t1
Lsat_s002.g0223.t1
Lsat_s002.g0224.t1ADHESION G-PROTEIN COUPLED RECEPTOR V1
Lsat_s002.g0225.t1COLLAGEN ALPHA
Lsat_s002.g0226.t1COLLAGEN ALPHA
Lsat_s002.g0227.t1
Lsat_s002.g0228.t1
Lsat_s002.g0229.t1
Lsat_s002.g0230.t1
Lsat_s002.g0231.t1
Lsat_s002.g0232.t1POU DOMAIN
Lsat_s002.g0233.t1
Lsat_s002.g0234.t1
Lsat_s002.g0235.t1ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN
Lsat_s002.g0236.t1TRANSMEMBRANE PROTEIN 242
Lsat_s002.g0237.t1UBIQUITIN-PROTEIN LIGASE E3A-RELATED
Lsat_s002.g0238.t1CHLORIDE INTRACELLULAR CHANNEL, ISOFORM A
Lsat_s002.g0239.t1PROFILIN
Lsat_s002.g0240.t1FAMILY WITH SEQUENCE SIMILARITY 228 MEMBER A
Lsat_s002.g0241.t1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
Lsat_s002.g0242.t1PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Lsat_s002.g0243.t1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
Lsat_s002.g0244.t1CAAX PRENYL PROTEASE 1
Lsat_s002.g0245.t1PROTEASOME ASSEMBLY CHAPERONE 1
Lsat_s002.g0246.t1SYNAPSE-ASSOCIATED PROTEIN
Lsat_s002.g0247.t1
Lsat_s002.g0248.t1HEADCASE PROTEIN
Lsat_s002.g0249.t1
Lsat_s002.g0250.t1-
Lsat_s002.g0251.t1RNA CLEAVAGE STIMULATION FACTOR
Lsat_s002.g0252.t1TUBULIN
Lsat_s002.g0253.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT I
Lsat_s002.g0254.t1NADH-UBIQUINONE OXIDOREDUCTASE ASHI SUBUNIT
Lsat_s002.g0255.t1
Lsat_s002.g0256.t1
Lsat_s002.g0257.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s002.g0258.t1
Lsat_s002.g0259.t1
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