
Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s002.g0360.t1 | PHOSPHOGLYCOLATE PHOSPHATASE |
| Lsat_s002.g0361.t1 | PROTEIN MMS22-LIKE |
| Lsat_s002.g0362.t1 | FATTY ACID AMIDE HYDROLASE |
| Lsat_s002.g0363.t1 | FATTY ACID AMIDE HYDROLASE |
| Lsat_s002.g0364.t1 | FATTY ACID AMIDE HYDROLASE |
| Lsat_s002.g0365.t1 | |
| Lsat_s002.g0366.t1 | MOLTING PROTEIN MLT-4 |
| Lsat_s002.g0367.t1 | ALLOGRAFT INFLAMMATORY FACTOR-1 |
| Lsat_s002.g0368.t1 | MOLTING PROTEIN MLT-4 |
| Lsat_s002.g0369.t1 | BA1-643 |
| Lsat_s002.g0370.t1 | CHROMOSOME 19 C19ORF81 HOMOLOG |
| Lsat_s002.g0371.t1 | |
| Lsat_s002.g0372.t1 | |
| Lsat_s002.g0373.t1 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Lsat_s002.g0374.t1 | FANCONI ANEMIA GROUP G PROTEIN FAMILY MEMBER |
| Lsat_s002.g0375.t1 | PROTEIN TFG |
| Lsat_s002.g0376.t1 | U7 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM10 |
| Lsat_s002.g0377.t1 | FANCONI ANEMIA CORE COMPLEX-ASSOCIATED PROTEIN 100 |
| Lsat_s002.g0378.t1 | ACETYLTRANSFERASE |
| Lsat_s002.g0379.t1 | |
| Lsat_s002.g0380.t1 | - |
| Lsat_s002.g0381.t1 | FMRFAMIDE RECEPTOR-RELATED |
| Lsat_s002.g0382.t1 | FMRFAMIDE RECEPTOR-RELATED |
| Lsat_s002.g0383.t1 | FMRFAMIDE RECEPTOR-RELATED |
| Lsat_s002.g0384.t1 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| Lsat_s002.g0385.t1 | |
| Lsat_s002.g0386.t1 | BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR |
| Lsat_s002.g0387.t1 | BASIC HELIX-LOOP-HELIX ZIP TRANSCRIPTION FACTOR |
| Lsat_s002.g0388.t1 | FMRFAMIDE RECEPTOR-RELATED |
| Lsat_s002.g0389.t1 | |
| Lsat_s002.g0390.t1 | FMRFAMIDE RECEPTOR-RELATED |
| Lsat_s002.g0391.t1 | ZGC:174862 |
| Lsat_s002.g0392.t1 | |
| Lsat_s002.g0393.t1 | WD REPEAT DOMAIN-CONTAINING FAMILY |
| Lsat_s002.g0394.t1 | MANNOSYL PHOSPHORYLINOSITOL CERAMIDE SYNTHASE |
| Lsat_s002.g0395.t1 | LITHOSTATHINE |
| Lsat_s002.g0396.t1 | RIBOSOMAL PROTEIN L13 |
| Lsat_s002.g0397.t1 | HSD9 |
| Lsat_s002.g0398.t1 | 5-HYDROXYTRYPTAMINE RECEPTOR |
| Lsat_s002.g0399.t1 | |
| Lsat_s002.g0400.t1 | FIBRINOGEN/TENASCIN/ANGIOPOEITIN |
| Lsat_s002.g0401.t1 | |
| Lsat_s002.g0402.t1 | |
| Lsat_s002.g0403.t1 | |
| Lsat_s002.g0404.t1 | TRYPTOPHAN--TRNA LIGASE, MITOCHONDRIAL |
| Lsat_s002.g0405.t1 | GUANYLYL CYCLASE |
| Lsat_s002.g0406.t1 | LEUCINE RICH REPEAT FAMILY PROTEIN |
| Lsat_s002.g0407.t1 | UNCHARACTERIZED |
| Lsat_s002.g0408.t1 | |
| Lsat_s002.g0409.t1 |