About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s002.g0460.t1
Lsat_s002.g0461.t1PROTEIN CBG17025
Lsat_s002.g0462.t1
Lsat_s002.g0463.t1NUCLEAR HORMONE RECEPTOR
Lsat_s002.g0464.t1
Lsat_s002.g0465.t1
Lsat_s002.g0466.t1SOX TRANSCRIPTION FACTOR
Lsat_s002.g0467.t1SYNAPTONEMAL COMPLEX PROTEIN 1
Lsat_s002.g0468.t1LIN-24 (TWENTY-FOUR) LIKE
Lsat_s002.g0469.t1LIN-24 (TWENTY-FOUR) LIKE
Lsat_s002.g0470.t1AROMATIC AMINO ACID HYDROXYLASE
Lsat_s002.g0471.t1PEPTIDASE M20
Lsat_s002.g0472.t1BTB/POZ DOMAIN-CONTAINING PROTEIN 10-RELATED
Lsat_s002.g0473.t1DOWNSTREAM NEIGHBOR OF SON
Lsat_s002.g0474.t1PROTEIN CBG11839-RELATED
Lsat_s002.g0475.t1PROTEIN SON
Lsat_s002.g0476.t1MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED
Lsat_s002.g0477.t1
Lsat_s002.g0478.t1INTEGRASE CORE DOMAIN CONTAINING PROTEIN
Lsat_s002.g0479.t1
Lsat_s002.g0480.t1RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN
Lsat_s002.g0481.t1PYRIDOXAL KINASE
Lsat_s002.g0482.t1PYRIDOXAL KINASE
Lsat_s002.g0483.t1
Lsat_s002.g0484.t1PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR
Lsat_s002.g0485.t1PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT BACTERIAL AND ORGANELLAR
Lsat_s002.g0486.t1SNF2/RAD54 HELICASE FAMILY
Lsat_s002.g0487.t1PROTEIN CBG26694
Lsat_s002.g0488.t1DUF914-RELATED
Lsat_s002.g0489.t1DRAB11-RELATED
Lsat_s002.g0490.t1CYTOCHROME B5 REDUCTASE 4 FAMILY MEMBER
Lsat_s002.g0491.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s002.g0492.t1ACTIN
Lsat_s002.g0493.t1WD40 REPEAT PROTEIN
Lsat_s002.g0494.t1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s002.g0495.t1CS DOMAIN-CONTAINING PROTEIN
Lsat_s002.g0496.t1
Lsat_s002.g0497.t1
Lsat_s002.g0498.t1
Lsat_s002.g0499.t1POL PROTEIN
Lsat_s002.g0500.t1PDZ AND LIM DOMAIN PROTEIN ZASP
Lsat_s002.g0501.t1TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED
Lsat_s002.g0502.t1T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN
Lsat_s002.g0503.t1UNCHARACTERIZED
Lsat_s002.g0504.t1TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 12
Lsat_s002.g0505.t1
Lsat_s002.g0506.t1CHITINASE DOMAIN-CONTAINING PROTEIN 1 FAMILY MEMBER
Lsat_s002.g0507.t1TESTIS-SPECIFIC PROTEIN PBS13 T-COMPLEX 11
Lsat_s002.g0508.t1ACID AMIDASE
Lsat_s002.g0509.t1DPY-19-LIKE 1, LIKE (H. SAPIENS)
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