About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s002.g0560.t1
Lsat_s002.g0561.t1DNA POLYMERASE ZETA CATALYTIC SUBUNIT
Lsat_s002.g0562.t1SUPEROXIDE DISMUTASE CU-ZN -RELATED
Lsat_s002.g0563.t1EXPORTIN 4,7-RELATED
Lsat_s002.g0564.t1SERINE/THREONINE-PROTEIN KINASE
Lsat_s002.g0565.t1UPF0240 PROTEIN
Lsat_s002.g0566.t1OS05G0521000 PROTEIN
Lsat_s002.g0567.t1UNCHARACTERIZED
Lsat_s002.g0568.t1UNCHARACTERIZED
Lsat_s002.g0569.t1POLYCYSTIC KIDNEY AND HEPATIC DISEASE 1 (AUTOSOMAL RECESSIVE)-LIKE 1
Lsat_s002.g0570.t1COLLAGEN IV NC1 DOMAIN-CONTAINING PROTEIN
Lsat_s002.g0571.t1VOLTAGE-DEPENDENT CALCIUM CHANNEL SUBUNIT ALPHA-2/DELTA-RELATED
Lsat_s002.g0572.t1
Lsat_s002.g0573.t1POPEYE DOMAIN CONTAINING PROTEIN
Lsat_s002.g0574.t1POPEYE DOMAIN CONTAINING PROTEIN
Lsat_s002.g0575.t139S RIBOSOMAL PROTEIN L43
Lsat_s002.g0576.t1BETA-1,4-GALACTOSYLTRANSFERASE
Lsat_s002.g0577.t1
Lsat_s002.g0578.t1CHEMOKINE C-C MOTIF RECEPTOR 1
Lsat_s002.g0579.t1METABOTROPIC GLUTAMATE RECEPTOR
Lsat_s002.g0580.t1METABOTROPIC GLUTAMATE RECEPTOR
Lsat_s002.g0581.t1LORICRIN
Lsat_s002.g0582.t1
Lsat_s002.g0583.t1MAJOR FACILITATOR SUPERFAMILY PROTEIN-RELATED
Lsat_s002.g0584.t1TETRASPANIN
Lsat_s002.g0585.t1PROTEIN CBG04600
Lsat_s002.g0586.t1PROTEIN CBG04600
Lsat_s002.g0587.t1MICROSOMAL GLUTATHIONE S-TRANSFERASE
Lsat_s002.g0588.t1CYSTEINE PROTEASE FAMILY C1-RELATED
Lsat_s002.g0589.t1
Lsat_s002.g0590.t1RNA-BINDING PROTEIN RELATED
Lsat_s002.g0591.t1RNA HELICASE
Lsat_s002.g0592.t1
Lsat_s002.g0593.t1DNAJ HOMOLOG SUBFAMILY C MEMBER 8/LIPOPOLYSACCHARIDE SPECIFIC RESPONSE-7-RELATED
Lsat_s002.g0594.t1GALACTOSE-3-O-SULFOTRANSFERASE
Lsat_s002.g0595.t1CENTROSOMAL PROTEIN OF 162 KDA
Lsat_s002.g0596.t1SERINE PROTEASE INHIBITOR, SERPIN
Lsat_s002.g0597.t1
Lsat_s002.g0598.t1
Lsat_s002.g0599.t1
Lsat_s002.g0600.t1CADHERIN-23
Lsat_s002.g0601.t1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
Lsat_s002.g0602.t160S RIBOSOMAL PROTEIN L24
Lsat_s002.g0603.t1
Lsat_s002.g0604.t1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Lsat_s002.g0605.t1BLR2807 PROTEIN
Lsat_s002.g0606.t1TRANSGELIN
Lsat_s002.g0607.t1O-ACYLTRANSFERASE (WSD1-LIKE) FAMILY PROTEIN
Lsat_s002.g0608.t1LD44813P
Lsat_s002.g0609.t1
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