About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s002.g0660.t1
Lsat_s002.g0661.t1
Lsat_s002.g0662.t1
Lsat_s002.g0663.t1
Lsat_s002.g0664.t1U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11
Lsat_s002.g0665.t1
Lsat_s002.g0666.t1
Lsat_s002.g0667.t1
Lsat_s002.g0668.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s002.g0669.t1
Lsat_s002.g0670.t1
Lsat_s002.g0671.t1
Lsat_s002.g0672.t1
Lsat_s002.g0673.t1
Lsat_s002.g0674.t1
Lsat_s002.g0675.t1
Lsat_s002.g0676.t1
Lsat_s002.g0677.t1POU DOMAIN
Lsat_s002.g0678.t1
Lsat_s002.g0679.t1
Lsat_s002.g0680.t1
Lsat_s002.g0681.t1
Lsat_s002.g0682.t1UNCHARACTERIZED
Lsat_s002.g0683.t13-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE
Lsat_s002.g0684.t13-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE
Lsat_s002.g0685.t1NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1
Lsat_s002.g0686.t1BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 3
Lsat_s002.g0687.t1L-CYSTEINE DESULFHYDRASE
Lsat_s002.g0688.t1ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER
Lsat_s002.g0689.t1
Lsat_s002.g0690.t1
Lsat_s002.g0691.t1
Lsat_s002.g0692.t1
Lsat_s002.g0693.t1GLUTAMATE SYNTHASE [NADPH] SMALL CHAIN
Lsat_s002.g0694.t1PF6
Lsat_s002.g0695.t1ZINC FINGER PROTEIN
Lsat_s002.g0696.t1ZINC FINGER MYM-TYPE PROTEIN
Lsat_s002.g0697.t1RNA RECOGNITION MOTIF-CONTAINING
Lsat_s002.g0698.t1
Lsat_s002.g0699.t1SODIUM/POTASSIUM-DEPENDENT ATPASE BETA SUBUNIT
Lsat_s002.g0700.t1CALCIUM-RESPONSIVE TRANSCRIPTION FACTOR
Lsat_s002.g0701.t1ACETYL-COA CARBOXYLASE, ISOFORM A
Lsat_s002.g0702.t1CENTROSOMAL PROTEIN 2
Lsat_s002.g0703.t1ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED
Lsat_s002.g0704.t1GLUCOCORTICOID MODULATORY ELEMENT-BINDING PROTEIN
Lsat_s002.g0705.t1TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1
Lsat_s002.g0706.t1LYMPHOID-RESTRICTED MEMBRANE PROTEIN, JAW1
Lsat_s002.g0707.t1G-PROTEIN COUPLED RECEPTOR 158-RELATED
Lsat_s002.g0708.t1
Lsat_s002.g0709.t1
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