About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s002.g0610.t1RWD DOMAIN-CONTAINING PROTEIN
Lsat_s002.g0611.t1
Lsat_s002.g0612.t1
Lsat_s002.g0613.t1DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED
Lsat_s002.g0614.t1DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED
Lsat_s002.g0615.t1
Lsat_s002.g0616.t1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Lsat_s002.g0617.t1-
Lsat_s002.g0618.t1HISTONE DEACETYLASE HDAC1-RELATED
Lsat_s002.g0619.t1CTP SYNTHASE
Lsat_s002.g0620.t1SMITH-MAGENIS SYNDROME REGION GENE 8 PROTEIN
Lsat_s002.g0621.t1SMITH-MAGENIS SYNDROME REGION GENE 8 PROTEIN
Lsat_s002.g0622.t1
Lsat_s002.g0623.t1ARYL HYDROCARBON RECEPTOR
Lsat_s002.g0624.t1
Lsat_s002.g0625.t1AAA DOMAIN-CONTAINING
Lsat_s002.g0626.t1
Lsat_s002.g0627.t1MICROTUBULE-ASSOCIATED PROTEIN
Lsat_s002.g0628.t1CYTOKINE RECEPTOR
Lsat_s002.g0629.t1TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3
Lsat_s002.g0630.t1FLAVIN MONOAMINE OXIDASE
Lsat_s002.g0631.t1SOLUTE CARRIER FAMILY 40 MEMBER
Lsat_s002.g0632.t1PROTEIN CBG26694
Lsat_s002.g0633.t1
Lsat_s002.g0634.t1SOLUTE CARRIER FAMILY 40 MEMBER
Lsat_s002.g0635.t1SOLUTE CARRIER FAMILY 40 MEMBER
Lsat_s002.g0636.t1SOLUTE CARRIER FAMILY 40 MEMBER
Lsat_s002.g0637.t1TUBULIN POLYGLUTAMYLASE
Lsat_s002.g0638.t1
Lsat_s002.g0639.t1UBX DOMAIN CONTAINING PROTEIN
Lsat_s002.g0640.t1
Lsat_s002.g0641.t1MUCIN 4-RELATED
Lsat_s002.g0642.t1ATPASES OF THE PP SUPERFAMILY-RELATED
Lsat_s002.g0643.t1
Lsat_s002.g0644.t1UNCHARACTERIZED
Lsat_s002.g0645.t1
Lsat_s002.g0646.t1
Lsat_s002.g0647.t1
Lsat_s002.g0648.t1BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
Lsat_s002.g0649.t1
Lsat_s002.g0650.t1
Lsat_s002.g0651.t1
Lsat_s002.g0652.t1
Lsat_s002.g0653.t1
Lsat_s002.g0654.t1
Lsat_s002.g0655.t1CLATHRIN ASSEMBLY PROTEIN
Lsat_s002.g0656.t1
Lsat_s002.g0657.t1T-CELL ACTIVATION RHO GTPASE ACTIVATING PROTEIN-RELATED
Lsat_s002.g0658.t1
Lsat_s002.g0659.t1RIBOSOMAL PROTEIN S9
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