
Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s002.g0410.t1 | FMRFAMIDE RECEPTOR-RELATED |
| Lsat_s002.g0411.t1 | EXS-RELATED PROTEIN |
| Lsat_s002.g0412.t1 | |
| Lsat_s002.g0413.t1 | |
| Lsat_s002.g0414.t1 | |
| Lsat_s002.g0415.t1 | |
| Lsat_s002.g0416.t1 | FMRFAMIDE RECEPTOR-RELATED |
| Lsat_s002.g0417.t1 | |
| Lsat_s002.g0418.t1 | |
| Lsat_s002.g0419.t1 | FMRFAMIDE RECEPTOR-RELATED |
| Lsat_s002.g0420.t1 | |
| Lsat_s002.g0421.t1 | LD39211P |
| Lsat_s002.g0422.t1 | AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED |
| Lsat_s002.g0423.t1 | |
| Lsat_s002.g0424.t1 | SPLICING FACTOR YJU2 |
| Lsat_s002.g0425.t1 | |
| Lsat_s002.g0426.t1 | UNCHARACTERIZED |
| Lsat_s002.g0427.t1 | SIT4 YEAST -ASSOCIATING PROTEIN-RELATED |
| Lsat_s002.g0428.t1 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13 |
| Lsat_s002.g0429.t1 | |
| Lsat_s002.g0430.t1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
| Lsat_s002.g0431.t1 | |
| Lsat_s002.g0432.t1 | HYPOXIA-INDUCIBLE FACTOR 1 ALPHA |
| Lsat_s002.g0433.t1 | SLEI FAMILY PROTEIN |
| Lsat_s002.g0434.t1 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| Lsat_s002.g0435.t1 | IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG |
| Lsat_s002.g0436.t1 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
| Lsat_s002.g0437.t1 | ULP_PROTEASE DOMAIN-CONTAINING PROTEIN |
| Lsat_s002.g0438.t1 | DETERIN |
| Lsat_s002.g0439.t1 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
| Lsat_s002.g0440.t1 | NUCLEOTIDE KINASE |
| Lsat_s002.g0441.t1 | SERINE/THREONINE-PROTEIN KINASE ATM |
| Lsat_s002.g0442.t1 | SERINE/THREONINE-PROTEIN KINASE ATM |
| Lsat_s002.g0443.t1 | ASSOCIATE OF C-MYC AMY-1 |
| Lsat_s002.g0444.t1 | PREFOLDIN SUBUNIT 3 |
| Lsat_s002.g0445.t1 | CULLIN |
| Lsat_s002.g0446.t1 | SERINE/THREONINE PROTEIN KINASE |
| Lsat_s002.g0447.t1 | UNCHARACTERIZED |
| Lsat_s002.g0448.t1 | |
| Lsat_s002.g0449.t1 | |
| Lsat_s002.g0450.t1 | |
| Lsat_s002.g0451.t1 | PEROXYUREIDOACRYLATE/UREIDOACRYLATE AMIDOHYDROLASE-RELATED |
| Lsat_s002.g0452.t1 | TRANSPOSON |
| Lsat_s002.g0453.t1 | MEDIATOR COMPLEX SUBUNIT |
| Lsat_s002.g0454.t1 | |
| Lsat_s002.g0455.t1 | FMRFAMIDE RECEPTOR-RELATED |
| Lsat_s002.g0456.t1 | FMRFAMIDE RECEPTOR-RELATED |
| Lsat_s002.g0457.t1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
| Lsat_s002.g0458.t1 | RIBOSOMAL PROTEIN L7AE FAMILY MEMBER |
| Lsat_s002.g0459.t1 | TRANSPOSON TY3-I GAG-POL POLYPROTEIN |