About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s002.g0410.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s002.g0411.t1EXS-RELATED PROTEIN
Lsat_s002.g0412.t1
Lsat_s002.g0413.t1
Lsat_s002.g0414.t1
Lsat_s002.g0415.t1
Lsat_s002.g0416.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s002.g0417.t1
Lsat_s002.g0418.t1
Lsat_s002.g0419.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s002.g0420.t1
Lsat_s002.g0421.t1LD39211P
Lsat_s002.g0422.t1AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Lsat_s002.g0423.t1
Lsat_s002.g0424.t1SPLICING FACTOR YJU2
Lsat_s002.g0425.t1
Lsat_s002.g0426.t1UNCHARACTERIZED
Lsat_s002.g0427.t1SIT4 YEAST -ASSOCIATING PROTEIN-RELATED
Lsat_s002.g0428.t126S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13
Lsat_s002.g0429.t1
Lsat_s002.g0430.t1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
Lsat_s002.g0431.t1
Lsat_s002.g0432.t1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
Lsat_s002.g0433.t1SLEI FAMILY PROTEIN
Lsat_s002.g0434.t1RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING
Lsat_s002.g0435.t1IRON-SULFUR CLUSTER ASSEMBLY ENZYME NIFU HOMOLOG
Lsat_s002.g0436.t1ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
Lsat_s002.g0437.t1ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Lsat_s002.g0438.t1DETERIN
Lsat_s002.g0439.t1ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
Lsat_s002.g0440.t1NUCLEOTIDE KINASE
Lsat_s002.g0441.t1SERINE/THREONINE-PROTEIN KINASE ATM
Lsat_s002.g0442.t1SERINE/THREONINE-PROTEIN KINASE ATM
Lsat_s002.g0443.t1ASSOCIATE OF C-MYC AMY-1
Lsat_s002.g0444.t1PREFOLDIN SUBUNIT 3
Lsat_s002.g0445.t1CULLIN
Lsat_s002.g0446.t1SERINE/THREONINE PROTEIN KINASE
Lsat_s002.g0447.t1UNCHARACTERIZED
Lsat_s002.g0448.t1
Lsat_s002.g0449.t1
Lsat_s002.g0450.t1
Lsat_s002.g0451.t1PEROXYUREIDOACRYLATE/UREIDOACRYLATE AMIDOHYDROLASE-RELATED
Lsat_s002.g0452.t1TRANSPOSON
Lsat_s002.g0453.t1MEDIATOR COMPLEX SUBUNIT
Lsat_s002.g0454.t1
Lsat_s002.g0455.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s002.g0456.t1FMRFAMIDE RECEPTOR-RELATED
Lsat_s002.g0457.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Lsat_s002.g0458.t1RIBOSOMAL PROTEIN L7AE FAMILY MEMBER
Lsat_s002.g0459.t1TRANSPOSON TY3-I GAG-POL POLYPROTEIN
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