About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s003.g0084.t1JITTERBUG, ISOFORM N
Lsat_s003.g0085.t1JITTERBUG, ISOFORM N
Lsat_s003.g0086.t1
Lsat_s003.g0087.t1
Lsat_s003.g0088.t1
Lsat_s003.g0089.t1
Lsat_s003.g0090.t1LYSINE-SPECIFIC DEMETHYLASE
Lsat_s003.g0091.t1FUN14 DOMAIN CONTAINING
Lsat_s003.g0092.t1SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C
Lsat_s003.g0093.t1
Lsat_s003.g0094.t1
Lsat_s003.g0095.t1UNCHARACTERIZED
Lsat_s003.g0096.t1
Lsat_s003.g0097.t1-
Lsat_s003.g0098.t1
Lsat_s003.g0099.t1CALCIUM-BINDING PROTEIN 39-RELATED
Lsat_s003.g0100.t1
Lsat_s003.g0101.t1
Lsat_s003.g0102.t1
Lsat_s003.g0103.t1JITTERBUG, ISOFORM N
Lsat_s003.g0104.t1JITTERBUG, ISOFORM N
Lsat_s003.g0105.t1ALANYL-TRNA SYNTHETASE
Lsat_s003.g0106.t1
Lsat_s003.g0107.t1
Lsat_s003.g0108.t1
Lsat_s003.g0109.t1MATING RESPONSE PROTEIN POI2
Lsat_s003.g0110.t1-
Lsat_s003.g0111.t1-
Lsat_s003.g0112.t1
Lsat_s003.g0113.t1
Lsat_s003.g0114.t1
Lsat_s003.g0115.t1CXC DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s003.g0116.t1
Lsat_s003.g0117.t1
Lsat_s003.g0118.t1
Lsat_s003.g0119.t1
Lsat_s003.g0120.t1JITTERBUG, ISOFORM N
Lsat_s003.g0121.t1
Lsat_s003.g0122.t1ALANYL-TRNA SYNTHETASE
Lsat_s003.g0123.t1
Lsat_s003.g0124.t1
Lsat_s003.g0125.t1
Lsat_s003.g0126.t1
Lsat_s003.g0127.t1
Lsat_s003.g0128.t1
Lsat_s003.g0129.t1SI:CH211-171H4.7-RELATED
Lsat_s003.g0130.t1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Lsat_s003.g0131.t1
Lsat_s003.g0132.t1NOTCH LIGAND FAMILY MEMBER
Lsat_s003.g0133.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
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