About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s002.g0060.t1IONOTROPIC GLUTAMATE RECEPTOR
Lsat_s002.g0061.t1IONOTROPIC GLUTAMATE RECEPTOR
Lsat_s002.g0062.t1SERINE PROTEASE INHIBITOR, SERPIN
Lsat_s002.g0063.t1CENTROSOMAL PROTEIN CEP126
Lsat_s002.g0064.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s002.g0065.t1ZINC FINGER PROTEIN 294
Lsat_s002.g0066.t1
Lsat_s002.g0067.t1
Lsat_s002.g0068.t1NOTUM-RELATED
Lsat_s002.g0069.t1E3 UBIQUITIN-PROTEIN LIGASE SHPRH FAMILY MEMBER
Lsat_s002.g0070.t1UNCHARACTERIZED
Lsat_s002.g0071.t1MYOSIN
Lsat_s002.g0072.t1
Lsat_s002.g0073.t1
Lsat_s002.g0074.t1
Lsat_s002.g0075.t1
Lsat_s002.g0076.t1
Lsat_s002.g0077.t1
Lsat_s002.g0078.t1
Lsat_s002.g0079.t1
Lsat_s002.g0080.t1PEPTIDASE
Lsat_s002.g0081.t1THYLAKOID LUMENAL 17.4 KDA PROTEIN, CHLOROPLASTIC
Lsat_s002.g0082.t1
Lsat_s002.g0083.t1
Lsat_s002.g0084.t1CREB/ATF BZIP TRANSCRIPTION FACTOR
Lsat_s002.g0085.t1
Lsat_s002.g0086.t1
Lsat_s002.g0087.t1
Lsat_s002.g0088.t1UBIQUITINATION FACTOR E4
Lsat_s002.g0089.t1
Lsat_s002.g0090.t1TRACE AMINE-ASSOCIATED RECEPTOR 19N-RELATED
Lsat_s002.g0091.t1ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4
Lsat_s002.g0092.t1TRANSMEMBRANE PROTEIN 181
Lsat_s002.g0093.t1
Lsat_s002.g0094.t1SMALL MEMBRANE PROTEIN-RELATED
Lsat_s002.g0095.t1
Lsat_s002.g0096.t1SULFOTRANSFERASE SULT
Lsat_s002.g0097.t1
Lsat_s002.g0098.t1
Lsat_s002.g0099.t1
Lsat_s002.g0100.t1EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN
Lsat_s002.g0101.t128S RIBOSOMAL PROTEIN S15, MITOCHONDRIAL
Lsat_s002.g0102.t1PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED
Lsat_s002.g0103.t1
Lsat_s002.g0104.t1
Lsat_s002.g0105.t1
Lsat_s002.g0106.t1
Lsat_s002.g0107.t1
Lsat_s002.g0108.t1
Lsat_s002.g0109.t1
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