About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s001.g1151.t1CXC DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s001.g1152.t1JBTS17
Lsat_s001.g1153.t1
Lsat_s001.g1154.t1
Lsat_s001.g1155.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s001.g1156.t1MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 1
Lsat_s001.g1157.t1ADIPOR/PROGESTIN RECEPTOR-RELATED
Lsat_s001.g1158.t1FERM AND PDZ DOMAIN-CONTAINING PROTEIN FAMILY MEMBER
Lsat_s001.g1159.t1CYTOCHROME C OXIDASE SUBUNIT 5B, MITOCHONDRIAL
Lsat_s001.g1160.t1S-METHYL-5'-THIOADENOSINE PHOSPHORYLASE
Lsat_s001.g1161.t1CALCYPHOSIN
Lsat_s001.g1162.t1
Lsat_s001.g1163.t1FERROCHELATASE
Lsat_s001.g1164.t1DENDRITIC CELL-SPECIFIC TRANSMEMBRANE PROTEIN
Lsat_s001.g1165.t1
Lsat_s001.g1166.t1
Lsat_s001.g1167.t1
Lsat_s001.g1168.t1GLYCOSYLTRANSFERASE
Lsat_s001.g1169.t1
Lsat_s001.g1170.t1
Lsat_s001.g1171.t1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Lsat_s001.g1172.t1
Lsat_s001.g1173.t1
Lsat_s001.g1174.t1
Lsat_s001.g1175.t1BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
Lsat_s001.g1176.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s001.g1177.t1CAMK FAMILY PROTEIN KINASE
Lsat_s001.g1178.t1
Lsat_s001.g1179.t1LIM DOMAIN KINASE 1
Lsat_s001.g1180.t1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Lsat_s001.g1181.t1
Lsat_s001.g1182.t1
Lsat_s001.g1183.t1TRANSPOSON
Lsat_s001.g1184.t1
Lsat_s001.g1185.t1
Lsat_s001.g1186.t1
Lsat_s001.g1187.t1SOX TRANSCRIPTION FACTOR
Lsat_s001.g1188.t1
Lsat_s001.g1189.t1
Lsat_s001.g1190.t1
Lsat_s001.g1191.t1
Lsat_s001.g1192.t1
Lsat_s001.g1193.t1
Lsat_s001.g1194.t1
Lsat_s001.g1195.t1
Lsat_s001.g1196.t1SERINE/THREONINE-PROTEIN KINASE IAL-RELATED
Lsat_s001.g1197.t1MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Lsat_s001.g1198.t1LYSOSOMAL COBALAMIN TRANSPORTER-RELATED
Lsat_s001.g1199.t1
Lsat_s001.g1200.t1
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