About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s001.g0851.t1
Lsat_s001.g0852.t1SARCOSINE DEHYDROGENASE-RELATED
Lsat_s001.g0853.t1
Lsat_s001.g0854.t1
Lsat_s001.g0855.t1HISTIDINE TRIAD HIT PROTEIN
Lsat_s001.g0856.t1
Lsat_s001.g0857.t1
Lsat_s001.g0858.t1
Lsat_s001.g0859.t1
Lsat_s001.g0860.t1IMPORTIN-7, 8, 11
Lsat_s001.g0861.t1
Lsat_s001.g0862.t1
Lsat_s001.g0863.t1
Lsat_s001.g0864.t1METHYLTHIORIBOSE-1-PHOSPHATE ISOMERASE
Lsat_s001.g0865.t1
Lsat_s001.g0866.t1
Lsat_s001.g0867.t1DNA HELICASE-RELATED
Lsat_s001.g0868.t1
Lsat_s001.g0869.t1ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Lsat_s001.g0870.t1
Lsat_s001.g0871.t1TRANSPOSON
Lsat_s001.g0872.t1HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Lsat_s001.g0873.t1
Lsat_s001.g0874.t1PEPTIDASE
Lsat_s001.g0875.t1
Lsat_s001.g0876.t1UNNAMED PRODUCT
Lsat_s001.g0877.t1STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
Lsat_s001.g0878.t1DIPHTHAMIDE BIOSYNTHESIS PROTEIN
Lsat_s001.g0879.t1NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Lsat_s001.g0880.t1SIGNAL PEPTIDE PEPTIDASE
Lsat_s001.g0881.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 78
Lsat_s001.g0882.t1E3 UBIQUITIN-PROTEIN LIGASE KCMF1
Lsat_s001.g0883.t1ENVOPLAKIN
Lsat_s001.g0884.t1MRNA EXPORT FACTOR AND BUB3
Lsat_s001.g0885.t1CALCIUM BINDING PROTEINS
Lsat_s001.g0886.t1CALCIUM BINDING PROTEINS
Lsat_s001.g0887.t1
Lsat_s001.g0888.t1TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE
Lsat_s001.g0889.t1
Lsat_s001.g0890.t1RB1-INDUCIBLE COILED-COIL
Lsat_s001.g0891.t1GLIAL CELLS MISSING RELATED/GLIDE
Lsat_s001.g0892.t1
Lsat_s001.g0893.t1
Lsat_s001.g0894.t1SYNAPTONEMAL COMPLEX PROTEIN-RELATED
Lsat_s001.g0895.t1
Lsat_s001.g0896.t1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Lsat_s001.g0897.t1PROTEIN CBG26694
Lsat_s001.g0898.t1HOMEOBOX PROTEIN ARISTALESS
Lsat_s001.g0899.t1
Lsat_s001.g0900.t1BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED
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