About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s001.g0601.t1VACUOLAR PROTEIN SORTING 26 RELATED
Lsat_s001.g0602.t1
Lsat_s001.g0603.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 153
Lsat_s001.g0604.t1PHOSPHATIDYLGLYCEROPHOSPHATASE AND PROTEIN-TYROSINE PHOSPHATASE 1
Lsat_s001.g0605.t1SUCCINATE DEHYDROGENASE
Lsat_s001.g0606.t1NUCLEAR RECEPTOR SUBFAMILY 5 GROUP A
Lsat_s001.g0607.t1KNIRPS-RELATED PROTEIN-RELATED
Lsat_s001.g0608.t1
Lsat_s001.g0609.t1POLYCYSTIN FAMILY MEMBER
Lsat_s001.g0610.t1ATP SYNTHASE SUBUNIT
Lsat_s001.g0611.t1STEROL DESATURASE
Lsat_s001.g0612.t1SUGAR KINASE
Lsat_s001.g0613.t1SUGAR KINASE
Lsat_s001.g0614.t1NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT
Lsat_s001.g0615.t1NADH-UBIQUINONE OXIDOREDUCTASE 49 KDA SUBUNIT
Lsat_s001.g0616.t1TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED-RELATED
Lsat_s001.g0617.t1DYNEIN HEAVY CHAIN FAMILY PROTEIN
Lsat_s001.g0618.t1ASPARTYL PROTEASE-RELATED
Lsat_s001.g0619.t1NNP-1 PROTEIN NOVEL NUCLEAR PROTEIN 1 NOP52
Lsat_s001.g0620.t1CARNITINE O-ACYLTRANSFERASE
Lsat_s001.g0621.t1SERINE/THREONINE-PROTEIN PHOSPHATASE 2A REGULATORY SUBUNIT B
Lsat_s001.g0622.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 84
Lsat_s001.g0623.t1SID1 TRANSMEMBRANE FAMILY MEMEBER
Lsat_s001.g0624.t1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Lsat_s001.g0625.t1PROTEIN CBG26694
Lsat_s001.g0626.t1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Lsat_s001.g0627.t1TRANSMEMBRANE PROTEIN 136
Lsat_s001.g0628.t1
Lsat_s001.g0629.t1
Lsat_s001.g0630.t1PEROXISOMAL BIOGENESIS FACTOR 19
Lsat_s001.g0631.t1LEUCINE-RICH REPEAT-CONTAINING
Lsat_s001.g0632.t1TREHALASE
Lsat_s001.g0633.t1UBIQUITIN
Lsat_s001.g0634.t1
Lsat_s001.g0635.t1
Lsat_s001.g0636.t1
Lsat_s001.g0637.t1BASIGIN RELATED
Lsat_s001.g0638.t1
Lsat_s001.g0639.t1RNA BINDING MOTIF RBM PROTEIN -RELATED
Lsat_s001.g0640.t1
Lsat_s001.g0641.t1
Lsat_s001.g0642.t1LD33804P
Lsat_s001.g0643.t1GRIP AND COILED-COIL DOMAIN-CONTAINING PROTEIN 1
Lsat_s001.g0644.t1PEPTIDYLPROLYL ISOMERASE
Lsat_s001.g0645.t1NHL REPEAT-CONTAINING PROTEIN-RELATED
Lsat_s001.g0646.t1LARGE PROLINE-RICH PROTEIN BAG6
Lsat_s001.g0647.t1ENDOTHELIAL DIFFERENTIATION-RELATED FACTOR 1 MULTIPROTEIN BRIDGING FACTOR 1
Lsat_s001.g0648.t1
Lsat_s001.g0649.t1SPERM-SPECIFIC FAMILY, CLASS Q
Lsat_s001.g0650.t1TYROSINE-PROTEIN KINASE RECEPTOR
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