About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s001.g0551.t1
Lsat_s001.g0552.t1VALYL-TRNA SYNTHETASES
Lsat_s001.g0553.t1TFIIH, POLYPEPTIDE 4
Lsat_s001.g0554.t1PRESEQUENCE PROTEASE
Lsat_s001.g0555.t1ATF6, ISOFORM C
Lsat_s001.g0556.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 151
Lsat_s001.g0557.t1DNA REPAIR PROTEIN SWI5 HOMOLOG
Lsat_s001.g0558.t1
Lsat_s001.g0559.t1
Lsat_s001.g0560.t1PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED
Lsat_s001.g0561.t1AKNA DOMAIN-CONTAINING PROTEIN
Lsat_s001.g0562.t1HEN1
Lsat_s001.g0563.t1
Lsat_s001.g0564.t1
Lsat_s001.g0565.t1EGF-LIKE-DOMAIN, MULTIPLE 7, 8
Lsat_s001.g0566.t1
Lsat_s001.g0567.t1
Lsat_s001.g0568.t1
Lsat_s001.g0569.t1
Lsat_s001.g0570.t1PROTEIN SEL-1 HOMOLOG 3
Lsat_s001.g0571.t1UNCHARACTERIZED
Lsat_s001.g0572.t1
Lsat_s001.g0573.t1
Lsat_s001.g0574.t1ZINC FINGER PROTEIN
Lsat_s001.g0575.t1
Lsat_s001.g0576.t1
Lsat_s001.g0577.t1
Lsat_s001.g0578.t1ZINC FINGER AND SCAN DOMAIN-CONTAINING
Lsat_s001.g0579.t1
Lsat_s001.g0580.t1PROLINE OXIDASE
Lsat_s001.g0581.t1PROLINE OXIDASE
Lsat_s001.g0582.t1
Lsat_s001.g0583.t1
Lsat_s001.g0584.t1
Lsat_s001.g0585.t1FLOTILLIN-RELATED
Lsat_s001.g0586.t1GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1
Lsat_s001.g0587.t1RNA HELICASE
Lsat_s001.g0588.t1GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
Lsat_s001.g0589.t1
Lsat_s001.g0590.t1
Lsat_s001.g0591.t1TYROSINE-PROTEIN KINASE RECEPTOR
Lsat_s001.g0592.t1
Lsat_s001.g0593.t1SORTILIN RELATED
Lsat_s001.g0594.t1
Lsat_s001.g0595.t1
Lsat_s001.g0596.t1
Lsat_s001.g0597.t1
Lsat_s001.g0598.t1
Lsat_s001.g0599.t1ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT
Lsat_s001.g0600.t1COILED-COIL DOMAIN-CONTAINING PROTEIN 153
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