About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s001.g0251.t1
Lsat_s001.g0252.t1
Lsat_s001.g0253.t1
Lsat_s001.g0254.t1MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED
Lsat_s001.g0255.t1
Lsat_s001.g0256.t1
Lsat_s001.g0257.t1HYDROXYLAMINE REDUCTASE
Lsat_s001.g0258.t1
Lsat_s001.g0259.t1DIVALENT CATION TOLERANCE CUTA-RELATED
Lsat_s001.g0260.t1UNCHARACTERIZED
Lsat_s001.g0261.t1UNCHARACTERIZED
Lsat_s001.g0262.t1
Lsat_s001.g0263.t1LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED
Lsat_s001.g0264.t1E3 UBIQUITIN-PROTEIN LIGASE RNF26
Lsat_s001.g0265.t1KELCH PROTEIN
Lsat_s001.g0266.t1HEAT SHOCK PROTEIN 70KDA
Lsat_s001.g0267.t1HISTONE ACETYLTRANSFERASE
Lsat_s001.g0268.t1NEPHRIN
Lsat_s001.g0269.t1MYCOPHENOLIC ACID ACYL-GLUCURONIDE ESTERASE, MITOCHONDRIAL
Lsat_s001.g0270.t1CELL DIVISION PROTEIN KINASE
Lsat_s001.g0271.t1UPF0428 PROTEIN CXORF56
Lsat_s001.g0272.t1EUKARYOTIC TRANSLATION INITIATION FACTOR 2A
Lsat_s001.g0273.t1PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE
Lsat_s001.g0274.t1MAMMALIAN EPENDYMIN-RELATED PROTEIN 1
Lsat_s001.g0275.t1MAMMALIAN EPENDYMIN-RELATED PROTEIN 1
Lsat_s001.g0276.t1
Lsat_s001.g0277.t1
Lsat_s001.g0278.t1
Lsat_s001.g0279.t1
Lsat_s001.g0280.t1
Lsat_s001.g0281.t1SWIM-TYPE DOMAIN-CONTAINING PROTEIN
Lsat_s001.g0282.t1
Lsat_s001.g0283.t1ALLANTOINASE
Lsat_s001.g0284.t1CAT EYE SYNDROME CRITICAL REGION PROTEIN 6
Lsat_s001.g0285.t1PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED
Lsat_s001.g0286.t1TUBULIN
Lsat_s001.g0287.t1ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED
Lsat_s001.g0288.t1VANG-LIKE PROTEIN
Lsat_s001.g0289.t1
Lsat_s001.g0290.t1RPA-RELATED PROTEIN RADX
Lsat_s001.g0291.t1ATP SYNTHASE COUPLING FACTOR 6, MITOCHONDRIAL
Lsat_s001.g0292.t1ETS
Lsat_s001.g0293.t1RADIAL SPOKE HEAD 1 HOMOLOG
Lsat_s001.g0294.t1ZINC FINGER PROTEIN ZPR1
Lsat_s001.g0295.t1MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40
Lsat_s001.g0296.t1
Lsat_s001.g0297.t1
Lsat_s001.g0298.t1
Lsat_s001.g0299.t1ETS
Lsat_s001.g0300.t1
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