Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s001.g0251.t1 | |
Lsat_s001.g0252.t1 | |
Lsat_s001.g0253.t1 | |
Lsat_s001.g0254.t1 | MEMBRANE-SPANNING 4-DOMAINS SUBFAMILY A MS4A -RELATED |
Lsat_s001.g0255.t1 | |
Lsat_s001.g0256.t1 | |
Lsat_s001.g0257.t1 | HYDROXYLAMINE REDUCTASE |
Lsat_s001.g0258.t1 | |
Lsat_s001.g0259.t1 | DIVALENT CATION TOLERANCE CUTA-RELATED |
Lsat_s001.g0260.t1 | UNCHARACTERIZED |
Lsat_s001.g0261.t1 | UNCHARACTERIZED |
Lsat_s001.g0262.t1 | |
Lsat_s001.g0263.t1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED |
Lsat_s001.g0264.t1 | E3 UBIQUITIN-PROTEIN LIGASE RNF26 |
Lsat_s001.g0265.t1 | KELCH PROTEIN |
Lsat_s001.g0266.t1 | HEAT SHOCK PROTEIN 70KDA |
Lsat_s001.g0267.t1 | HISTONE ACETYLTRANSFERASE |
Lsat_s001.g0268.t1 | NEPHRIN |
Lsat_s001.g0269.t1 | MYCOPHENOLIC ACID ACYL-GLUCURONIDE ESTERASE, MITOCHONDRIAL |
Lsat_s001.g0270.t1 | CELL DIVISION PROTEIN KINASE |
Lsat_s001.g0271.t1 | UPF0428 PROTEIN CXORF56 |
Lsat_s001.g0272.t1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 2A |
Lsat_s001.g0273.t1 | PLATELET-ACTIVATING FACTOR ACETYLHYDROLASE |
Lsat_s001.g0274.t1 | MAMMALIAN EPENDYMIN-RELATED PROTEIN 1 |
Lsat_s001.g0275.t1 | MAMMALIAN EPENDYMIN-RELATED PROTEIN 1 |
Lsat_s001.g0276.t1 | |
Lsat_s001.g0277.t1 | |
Lsat_s001.g0278.t1 | |
Lsat_s001.g0279.t1 | |
Lsat_s001.g0280.t1 | |
Lsat_s001.g0281.t1 | SWIM-TYPE DOMAIN-CONTAINING PROTEIN |
Lsat_s001.g0282.t1 | |
Lsat_s001.g0283.t1 | ALLANTOINASE |
Lsat_s001.g0284.t1 | CAT EYE SYNDROME CRITICAL REGION PROTEIN 6 |
Lsat_s001.g0285.t1 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE-RELATED |
Lsat_s001.g0286.t1 | TUBULIN |
Lsat_s001.g0287.t1 | ARYL HYDROCARBON RECEPTOR INTERACTING PROTEIN RELATED |
Lsat_s001.g0288.t1 | VANG-LIKE PROTEIN |
Lsat_s001.g0289.t1 | |
Lsat_s001.g0290.t1 | RPA-RELATED PROTEIN RADX |
Lsat_s001.g0291.t1 | ATP SYNTHASE COUPLING FACTOR 6, MITOCHONDRIAL |
Lsat_s001.g0292.t1 | ETS |
Lsat_s001.g0293.t1 | RADIAL SPOKE HEAD 1 HOMOLOG |
Lsat_s001.g0294.t1 | ZINC FINGER PROTEIN ZPR1 |
Lsat_s001.g0295.t1 | MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM40 |
Lsat_s001.g0296.t1 | |
Lsat_s001.g0297.t1 | |
Lsat_s001.g0298.t1 | |
Lsat_s001.g0299.t1 | ETS |
Lsat_s001.g0300.t1 |