About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s001.g0101.t1
Lsat_s001.g0102.t1
Lsat_s001.g0103.t1
Lsat_s001.g0104.t1YDJC DEACETYLASE FAMILY MEMBER
Lsat_s001.g0105.t1
Lsat_s001.g0106.t1MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
Lsat_s001.g0107.t1
Lsat_s001.g0108.t1
Lsat_s001.g0109.t1
Lsat_s001.g0110.t1CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)
Lsat_s001.g0111.t1CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44)
Lsat_s001.g0112.t1VOLTAGE-GATED POTASSIUM CHANNEL
Lsat_s001.g0113.t1HSC70CB, ISOFORM G-RELATED
Lsat_s001.g0114.t1FI24210P1
Lsat_s001.g0115.t1GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
Lsat_s001.g0116.t1
Lsat_s001.g0117.t1ORGANIC ANION TRANSPORTER
Lsat_s001.g0118.t1DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE
Lsat_s001.g0119.t1TOLL-LIKE RECEPTOR
Lsat_s001.g0120.t1DET1 HOMOLOG DE-ETIOLATED-1 HOMOLOG
Lsat_s001.g0121.t1
Lsat_s001.g0122.t1
Lsat_s001.g0123.t1-
Lsat_s001.g0124.t1
Lsat_s001.g0125.t1
Lsat_s001.g0126.t1
Lsat_s001.g0127.t1TUBULIN MONOGLYCYLASE TTLL3
Lsat_s001.g0128.t1PROTEIN CBG11839-RELATED
Lsat_s001.g0129.t1UNCHARACTERIZED
Lsat_s001.g0130.t1TUBULIN MONOGLYCYLASE TTLL3
Lsat_s001.g0131.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Lsat_s001.g0132.t1ZINC FINGER PROTEIN
Lsat_s001.g0133.t1
Lsat_s001.g0134.t1INNEXIN
Lsat_s001.g0135.t1INNEXIN
Lsat_s001.g0136.t1
Lsat_s001.g0137.t1
Lsat_s001.g0138.t1
Lsat_s001.g0139.t1
Lsat_s001.g0140.t1NITRIC OXIDE SYNTHASE-RELATED
Lsat_s001.g0141.t1TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN15
Lsat_s001.g0142.t1SYNAPTOTAGMIN
Lsat_s001.g0143.t1AP COMPLEX SUBUNIT MU
Lsat_s001.g0144.t1IRON-SULFUR DOMAIN CONTAINING PROTEIN
Lsat_s001.g0145.t1
Lsat_s001.g0146.t1
Lsat_s001.g0147.t1
Lsat_s001.g0148.t1EGF-LIKE DOMAIN-CONTAINING PROTEIN
Lsat_s001.g0149.t1
Lsat_s001.g0150.t1TETRATRICOPEPTIDE REPEAT PROTEIN 16
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