About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s001.g0151.t1ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN-CONTAINING PROTEIN
Lsat_s001.g0152.t1SARCOSINE DEHYDROGENASE-RELATED
Lsat_s001.g0153.t1
Lsat_s001.g0154.t1
Lsat_s001.g0155.t1NEMITIN (NEURONAL ENRICHED MAP INTERACTING PROTEIN) HOMOLOG
Lsat_s001.g0156.t1SERINE/THREONINE-PROTEIN KINASE
Lsat_s001.g0157.t1CALICYLIN BINDING PROTEIN
Lsat_s001.g0158.t160 KDA RIBONUCLEOPROTEIN SSA/RO
Lsat_s001.g0159.t1VACUOLAR ATP SYNTHASE SUBUNIT G
Lsat_s001.g0160.t1DYNAMIN
Lsat_s001.g0161.t1
Lsat_s001.g0162.t1
Lsat_s001.g0163.t1OPSIN
Lsat_s001.g0164.t1
Lsat_s001.g0165.t1SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN
Lsat_s001.g0166.t1
Lsat_s001.g0167.t1
Lsat_s001.g0168.t1
Lsat_s001.g0169.t1
Lsat_s001.g0170.t1
Lsat_s001.g0171.t1NECTIN-RELATED
Lsat_s001.g0172.t1POLYCYSTIN FAMILY MEMBER
Lsat_s001.g0173.t1
Lsat_s001.g0174.t1TRANSMEMBRANE PROTEIN
Lsat_s001.g0175.t1
Lsat_s001.g0176.t1UNCHARACTERIZED
Lsat_s001.g0177.t1UNCHARACTERIZED
Lsat_s001.g0178.t1LAMGL DOMAIN-CONTAINING PROTEIN
Lsat_s001.g0179.t1UNCHARACTERIZED
Lsat_s001.g0180.t1NITRILASE-RELATED
Lsat_s001.g0181.t1
Lsat_s001.g0182.t1NITRILASE-RELATED
Lsat_s001.g0183.t1
Lsat_s001.g0184.t1NITRILASE-RELATED
Lsat_s001.g0185.t1
Lsat_s001.g0186.t1NITRILASE-RELATED
Lsat_s001.g0187.t1RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM D
Lsat_s001.g0188.t1
Lsat_s001.g0189.t1MAJOR FACILITATOR SUPERFAMILY TRANSPORTER 16, ISOFORM B
Lsat_s001.g0190.t1MANNOSYL PHOSPHORYLINOSITOL CERAMIDE SYNTHASE
Lsat_s001.g0191.t1SOLUTE CARRIER FAMILY 52
Lsat_s001.g0192.t1
Lsat_s001.g0193.t1
Lsat_s001.g0194.t1
Lsat_s001.g0195.t1
Lsat_s001.g0196.t1
Lsat_s001.g0197.t1
Lsat_s001.g0198.t1UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Lsat_s001.g0199.t1
Lsat_s001.g0200.t1
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