About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s001.g0301.t1ETS
Lsat_s001.g0302.t1
Lsat_s001.g0303.t1
Lsat_s001.g0304.t1
Lsat_s001.g0305.t1
Lsat_s001.g0306.t1
Lsat_s001.g0307.t1
Lsat_s001.g0308.t1
Lsat_s001.g0309.t1
Lsat_s001.g0310.t1LEUCINE ZIPPER PROTEIN 4-RELATED
Lsat_s001.g0311.t1HEAT SHOCK PROTEIN HSP-12.2-RELATED
Lsat_s001.g0312.t1HEAT SHOCK PROTEIN HSP-12.2-RELATED
Lsat_s001.g0313.t1HEAT SHOCK PROTEIN HSP-12.2-RELATED
Lsat_s001.g0314.t1HEAT SHOCK PROTEIN HSP-12.2-RELATED
Lsat_s001.g0315.t1HEAT SHOCK PROTEIN HSP-12.2-RELATED
Lsat_s001.g0316.t1OUT AT FIRST
Lsat_s001.g0317.t1
Lsat_s001.g0318.t1CHYMOTRYPSIN-RELATED
Lsat_s001.g0319.t1CDC42 GTPASE-ACTIVATING PROTEIN
Lsat_s001.g0320.t1COATOMER SUBUNIT DELTA
Lsat_s001.g0321.t1UNCHARACTERIZED
Lsat_s001.g0322.t1PORPHOBILINOGEN DEAMINASE
Lsat_s001.g0323.t1
Lsat_s001.g0324.t1ZINC FINGER PROTEIN
Lsat_s001.g0325.t1
Lsat_s001.g0326.t1PASIFLORA 1, ISOFORM A-RELATED
Lsat_s001.g0327.t1PROTOPORPHYRINOGEN OXIDASE
Lsat_s001.g0328.t1
Lsat_s001.g0329.t1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Lsat_s001.g0330.t1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Lsat_s001.g0331.t1
Lsat_s001.g0332.t1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Lsat_s001.g0333.t1
Lsat_s001.g0334.t1HMG-BOX TRANSCRIPTION FACTOR BBX
Lsat_s001.g0335.t1LD33695P
Lsat_s001.g0336.t1PRE-MRNA SPLICING FACTOR
Lsat_s001.g0337.t1FI04487P
Lsat_s001.g0338.t1FI04487P
Lsat_s001.g0339.t1FI04487P
Lsat_s001.g0340.t1
Lsat_s001.g0341.t1OVOCHYMASE-RELATED
Lsat_s001.g0342.t1TRANSCRIPTIONAL ADAPTER 1
Lsat_s001.g0343.t1TRANSCRIPTION INITIATION FACTOR TFIID
Lsat_s001.g0344.t1FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS
Lsat_s001.g0345.t1
Lsat_s001.g0346.t1
Lsat_s001.g0347.t1PNAS-3 RELATED
Lsat_s001.g0348.t1LONG-CHAIN FATTY ACID TRANSPORT PROTEIN
Lsat_s001.g0349.t1
Lsat_s001.g0350.t1
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