Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s001.g0051.t1 | SURFEIT LOCUS PROTEIN |
Lsat_s001.g0052.t1 | ATP-DEPENDENT RNA HELICASE |
Lsat_s001.g0053.t1 | ARYLSULFATASE |
Lsat_s001.g0054.t1 | |
Lsat_s001.g0055.t1 | |
Lsat_s001.g0056.t1 | |
Lsat_s001.g0057.t1 | |
Lsat_s001.g0058.t1 | |
Lsat_s001.g0059.t1 | N-ALPHA-ACETYLTRANSFERASE |
Lsat_s001.g0060.t1 | V-TYPE PROTON ATPASE CATALYTIC SUBUNIT A |
Lsat_s001.g0061.t1 | |
Lsat_s001.g0062.t1 | RHO FAMILY GTPASE |
Lsat_s001.g0063.t1 | AMMONIUM TRANSPORTER |
Lsat_s001.g0064.t1 | |
Lsat_s001.g0065.t1 | AMMONIUM TRANSPORTER |
Lsat_s001.g0066.t1 | CRUMBS FAMILY MEMBER |
Lsat_s001.g0067.t1 | O-ACYLTRANSFERASE |
Lsat_s001.g0068.t1 | NEPHRIN |
Lsat_s001.g0069.t1 | |
Lsat_s001.g0070.t1 | ATP-BINDING CASSETTE, SUB-FAMILY H, MEMBER 1 |
Lsat_s001.g0071.t1 | |
Lsat_s001.g0072.t1 | FMRFAMIDE RECEPTOR-RELATED |
Lsat_s001.g0073.t1 | NEPHRIN |
Lsat_s001.g0074.t1 | HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Lsat_s001.g0075.t1 | |
Lsat_s001.g0076.t1 | |
Lsat_s001.g0077.t1 | HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Lsat_s001.g0078.t1 | HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
Lsat_s001.g0079.t1 | |
Lsat_s001.g0080.t1 | RHO FAMILY GTPASE |
Lsat_s001.g0081.t1 | |
Lsat_s001.g0082.t1 | SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 2 |
Lsat_s001.g0083.t1 | SPINSTER |
Lsat_s001.g0084.t1 | SPERMATID WD-REPEAT PROTEIN |
Lsat_s001.g0085.t1 | |
Lsat_s001.g0086.t1 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 |
Lsat_s001.g0087.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s001.g0088.t1 | |
Lsat_s001.g0089.t1 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
Lsat_s001.g0090.t1 | |
Lsat_s001.g0091.t1 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 |
Lsat_s001.g0092.t1 | PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED |
Lsat_s001.g0093.t1 | GDP-FUCOSE PROTEIN O-FUCOSYLTRANSFERASE 1 |
Lsat_s001.g0094.t1 | PROTEIN ABHD14B-LIKE |
Lsat_s001.g0095.t1 | FAM11A, B PROTEIN |
Lsat_s001.g0096.t1 | PHOSPHOTYROSINE INTERACTION DOMAIN-CONTAINING FAMILY MEMBER |
Lsat_s001.g0097.t1 | UNCHARACTERIZED |
Lsat_s001.g0098.t1 | FOLYLPOLYGLUTAMATE SYNTHASE-RELATED |
Lsat_s001.g0099.t1 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5 |
Lsat_s001.g0100.t1 | FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED |