About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s001.g1001.t1PATHOGENESIS-RELATED FAMILY PROTEIN
Lsat_s001.g1002.t1
Lsat_s001.g1003.t1
Lsat_s001.g1004.t1COLLAGEN ALPHA
Lsat_s001.g1005.t1
Lsat_s001.g1006.t1MAP KINASE KINASE KINASE SSK2-RELATED-RELATED
Lsat_s001.g1007.t1
Lsat_s001.g1008.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s001.g1009.t1
Lsat_s001.g1010.t1
Lsat_s001.g1011.t1BETA-1,4-GALACTOSYLTRANSFERASE
Lsat_s001.g1012.t1
Lsat_s001.g1013.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Lsat_s001.g1014.t1
Lsat_s001.g1015.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Lsat_s001.g1016.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Lsat_s001.g1017.t1
Lsat_s001.g1018.t1TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Lsat_s001.g1019.t1BETA-1,4-GALACTOSYLTRANSFERASE
Lsat_s001.g1020.t1
Lsat_s001.g1021.t1PHOSPHOENOLPYRUVATE CARBOXYLASE
Lsat_s001.g1022.t1SULFOPYRUVATE DECARBOXYLASE SUBUNIT ALPHA
Lsat_s001.g1023.t1GLUTATHIONE S-TRANSFERASE
Lsat_s001.g1024.t1EH DOMAIN
Lsat_s001.g1025.t1FAM187
Lsat_s001.g1026.t1SPINDLE ASSEMBLY ABNORMAL PROTEIN 6 HOMOLOG
Lsat_s001.g1027.t1
Lsat_s001.g1028.t1NUCLEAR PORE COMPLEX PROTEIN NUP
Lsat_s001.g1029.t1
Lsat_s001.g1030.t1
Lsat_s001.g1031.t1
Lsat_s001.g1032.t1
Lsat_s001.g1033.t1E3 UBIQUITIN-PROTEIN LIGASE KCMF1
Lsat_s001.g1034.t1RNA HELICASE
Lsat_s001.g1035.t1NON-SMC ELEMENT 1-RELATED
Lsat_s001.g1036.t1
Lsat_s001.g1037.t1
Lsat_s001.g1038.t1
Lsat_s001.g1039.t1
Lsat_s001.g1040.t1
Lsat_s001.g1041.t1
Lsat_s001.g1042.t1
Lsat_s001.g1043.t1
Lsat_s001.g1044.t1
Lsat_s001.g1045.t1
Lsat_s001.g1046.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s001.g1047.t1
Lsat_s001.g1048.t1ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
Lsat_s001.g1049.t1
Lsat_s001.g1050.t1
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