Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
| Gene ID | Description |
|---|---|
| Lsat_s001.g1251.t1 | CASEIN KINASE-RELATED |
| Lsat_s001.g1252.t1 | |
| Lsat_s001.g1253.t1 | RP42 RELATED |
| Lsat_s001.g1254.t1 | FRG1 PROTEIN |
| Lsat_s001.g1255.t1 | HL07962P-RELATED |
| Lsat_s001.g1256.t1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| Lsat_s001.g1257.t1 | |
| Lsat_s001.g1258.t1 | PERICENTRIOLAR MATERIAL 1-RELATED |
| Lsat_s001.g1259.t1 | TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 2 |
| Lsat_s001.g1260.t1 | |
| Lsat_s001.g1261.t1 | |
| Lsat_s001.g1262.t1 | TETRATRICOPEPTIDE REPEAT PROTEIN 29 |
| Lsat_s001.g1263.t1 | TETRATRICOPEPTIDE REPEAT PROTEIN 29 |
| Lsat_s001.g1264.t1 | STAGA COMPLEX 65 SUBUNIT GAMMA |
| Lsat_s001.g1265.t1 | ETS |
| Lsat_s001.g1266.t1 | |
| Lsat_s001.g1267.t1 | |
| Lsat_s001.g1268.t1 | HSDA/SDA1-RELATED |
| Lsat_s001.g1269.t1 | UNCHARACTERIZED |
| Lsat_s001.g1270.t1 | DEADENYLATION COMPLEX SUBUNIT PAN3 |
| Lsat_s001.g1271.t1 | STEROL REGULATORY ELEMENT-BINDING PROTEIN |
| Lsat_s001.g1272.t1 | SEQUESTOSOME 1-RELATED |
| Lsat_s001.g1273.t1 | |
| Lsat_s001.g1274.t1 | |
| Lsat_s001.g1275.t1 | |
| Lsat_s001.g1276.t1 | |
| Lsat_s001.g1277.t1 | |
| Lsat_s001.g1278.t1 | FIBRINOGEN ALPHA CHAIN |
| Lsat_s001.g1279.t1 | TESTIS-EXPRESSED PROTEIN 264 |
| Lsat_s001.g1280.t1 | |
| Lsat_s001.g1281.t1 | |
| Lsat_s001.g1282.t1 | |
| Lsat_s001.g1283.t1 | |
| Lsat_s001.g1284.t1 | OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEIN |
| Lsat_s001.g1285.t1 | TRANSLATION FACTOR GUF1-RELATED |
| Lsat_s001.g1286.t1 | BETA-ALANINE-ACTIVATING ENZYME |
| Lsat_s001.g1287.t1 | ANAPHASE-PROMOTING COMPLEX 10 |
| Lsat_s001.g1288.t1 | ANKYRIN REPEAT AND SOCS BOX PROTEIN 17 |
| Lsat_s001.g1289.t1 | |
| Lsat_s001.g1290.t1 | |
| Lsat_s001.g1291.t1 | |
| Lsat_s001.g1292.t1 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| Lsat_s001.g1293.t1 | |
| Lsat_s001.g1294.t1 | SERINE/THREONINE-PROTEIN KINASE SAMKA-RELATED-RELATED |
| Lsat_s001.g1295.t1 | TRNA-AMINOACYLATION COFACTOR ARC1 FAMILY MEMBER |
| Lsat_s001.g1296.t1 | PHOSPHOLIPASE A-2-ACTIVATING PROTEIN |
| Lsat_s001.g1297.t1 | MOTILE SPERM DOMAIN-CONTAINING PROTEIN 2 |
| Lsat_s001.g1298.t1 | FANCONI ANEMIA GROUP B PROTEIN |
| Lsat_s001.g1299.t1 | |
| Lsat_s001.g1300.t1 | HEAT SHOCK PROTEIN HSP-12.2-RELATED |
