Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s002.g0010.t1 | CITRATE LYASE SUBUNIT BETA-RELATED |
Lsat_s002.g0011.t1 | S-ADENOSYLMETHIONINE DECARBOXYLASE |
Lsat_s002.g0012.t1 | CELL DIVISION PROTEIN KINASE |
Lsat_s002.g0013.t1 | NADH-UBIQUINONE OXIDOREDUCTASE B15 SUBUNIT |
Lsat_s002.g0014.t1 | POLYCOMB GROUP PROTEIN |
Lsat_s002.g0015.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s002.g0016.t1 | PROMININ PROM PROTEIN |
Lsat_s002.g0017.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s002.g0018.t1 | E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATED |
Lsat_s002.g0019.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s002.g0020.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s002.g0021.t1 | MONOCARBOXYLATE TRANSPORTER |
Lsat_s002.g0022.t1 | |
Lsat_s002.g0023.t1 | SPERMATOGENESIS-ASSOCIATED SERINE-RICH PROTEIN 1 |
Lsat_s002.g0024.t1 | GC-RICH SEQUENCE DNA-BINDING FACTOR |
Lsat_s002.g0025.t1 | MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE 7 |
Lsat_s002.g0026.t1 | |
Lsat_s002.g0027.t1 | SERINE PROTEASE INHIBITOR, SERPIN |
Lsat_s002.g0028.t1 | SERINE PROTEASE INHIBITOR, SERPIN |
Lsat_s002.g0029.t1 | SERINE PROTEASE INHIBITOR, SERPIN |
Lsat_s002.g0030.t1 | |
Lsat_s002.g0031.t1 | SERINE PROTEASE INHIBITOR, SERPIN |
Lsat_s002.g0032.t1 | SERINE PROTEASE INHIBITOR, SERPIN |
Lsat_s002.g0033.t1 | |
Lsat_s002.g0034.t1 | A-KINASE-INTERACTING PROTEIN 1 |
Lsat_s002.g0035.t1 | PROSTATE APOPTOSIS RESPONSE PROTEIN PAR-4 |
Lsat_s002.g0036.t1 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S28 |
Lsat_s002.g0037.t1 | PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 12 |
Lsat_s002.g0038.t1 | |
Lsat_s002.g0039.t1 | |
Lsat_s002.g0040.t1 | |
Lsat_s002.g0041.t1 | |
Lsat_s002.g0042.t1 | |
Lsat_s002.g0043.t1 | |
Lsat_s002.g0044.t1 | |
Lsat_s002.g0045.t1 | |
Lsat_s002.g0046.t1 | |
Lsat_s002.g0047.t1 | |
Lsat_s002.g0048.t1 | BASIGIN RELATED |
Lsat_s002.g0049.t1 | BASIGIN RELATED |
Lsat_s002.g0050.t1 | |
Lsat_s002.g0051.t1 | |
Lsat_s002.g0052.t1 | |
Lsat_s002.g0053.t1 | PAIRED IMMUNOGLOBULIN-LIKE TYPE 2 RECEPTOR |
Lsat_s002.g0054.t1 | |
Lsat_s002.g0055.t1 | |
Lsat_s002.g0056.t1 | PAIRED IMMUNOGLOBULIN-LIKE TYPE 2 RECEPTOR |
Lsat_s002.g0057.t1 | |
Lsat_s002.g0058.t1 | |
Lsat_s002.g0059.t1 |