About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s003.g0334.t1PR DOMAIN ZINC FINGER PROTEIN
Lsat_s003.g0335.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s003.g0336.t1
Lsat_s003.g0337.t1
Lsat_s003.g0338.t1
Lsat_s003.g0339.t1SODIUM/POTASSIUM/CALCIUM EXCHANGER
Lsat_s003.g0340.t1MONOCARBOXYLATE TRANSPORTER
Lsat_s003.g0341.t1FRAGILE X MENTAL RETARDATION SYNDROME-RELATED PROTEIN
Lsat_s003.g0342.t1
Lsat_s003.g0343.t1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Lsat_s003.g0344.t1WD REPEAT DOMAIN 44
Lsat_s003.g0345.t1LYSOSOME-ASSOCIATED MEMBRANE GLYCOPROTEIN
Lsat_s003.g0346.t1-
Lsat_s003.g0347.t1METHIONINE SULFOXIDE REDUCTASE
Lsat_s003.g0348.t1IRE1-RELATED
Lsat_s003.g0349.t1UNCHARACTERIZED
Lsat_s003.g0350.t1UNCHARACTERIZED
Lsat_s003.g0351.t1
Lsat_s003.g0352.t1-
Lsat_s003.g0353.t1
Lsat_s003.g0354.t1
Lsat_s003.g0355.t1
Lsat_s003.g0356.t1
Lsat_s003.g0357.t1
Lsat_s003.g0358.t1SOX TRANSCRIPTION FACTOR
Lsat_s003.g0359.t1
Lsat_s003.g0360.t1
Lsat_s003.g0361.t1
Lsat_s003.g0362.t1
Lsat_s003.g0363.t1
Lsat_s003.g0364.t1MULTI-COPPER OXIDASE
Lsat_s003.g0365.t1CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP
Lsat_s003.g0366.t1
Lsat_s003.g0367.t1
Lsat_s003.g0368.t1
Lsat_s003.g0369.t1CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP
Lsat_s003.g0370.t1UNCHARACTERIZED
Lsat_s003.g0371.t1CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP
Lsat_s003.g0372.t1
Lsat_s003.g0373.t1CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP
Lsat_s003.g0374.t1CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP
Lsat_s003.g0375.t1
Lsat_s003.g0376.t1
Lsat_s003.g0377.t1
Lsat_s003.g0378.t1
Lsat_s003.g0379.t1SERINE PROTEASE INHIBITOR, SERPIN
Lsat_s003.g0380.t1
Lsat_s003.g0381.t1
Lsat_s003.g0382.t1TRANSMEMBRANE PROTEIN 256
Lsat_s003.g0383.t1LD39211P
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