About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s003.g0484.t1
Lsat_s003.g0485.t1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 4
Lsat_s003.g0486.t1GLYCOSYLTRANSFERASE-RELATED
Lsat_s003.g0487.t1GLYCOSYLTRANSFERASE-RELATED
Lsat_s003.g0488.t1GH11358P
Lsat_s003.g0489.t1STIMULATOR OF INTERFERON GENES PROTEIN
Lsat_s003.g0490.t1DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN
Lsat_s003.g0491.t1G PROTEIN PATHWAY SUPPRESSOR 2
Lsat_s003.g0492.t1RAN GTPASE-ACTIVATING PROTEIN 1
Lsat_s003.g0493.t1IRE1-RELATED
Lsat_s003.g0494.t1IRE1-RELATED
Lsat_s003.g0495.t1-
Lsat_s003.g0496.t1
Lsat_s003.g0497.t1
Lsat_s003.g0498.t1
Lsat_s003.g0499.t1HISTONE DEACETYLASE COMPLEX SUBUNIT SAP130
Lsat_s003.g0500.t1O-ACYLTRANSFERASE
Lsat_s003.g0501.t1
Lsat_s003.g0502.t1O-ACYLTRANSFERASE
Lsat_s003.g0503.t1O-ACYLTRANSFERASE
Lsat_s003.g0504.t1O-ACYLTRANSFERASE
Lsat_s003.g0505.t1O-ACYLTRANSFERASE
Lsat_s003.g0506.t1O-ACYLTRANSFERASE
Lsat_s003.g0507.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s003.g0508.t1
Lsat_s003.g0509.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s003.g0510.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s003.g0511.t1O-ACYLTRANSFERASE
Lsat_s003.g0512.t1
Lsat_s003.g0513.t1CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP
Lsat_s003.g0514.t1
Lsat_s003.g0515.t1
Lsat_s003.g0516.t1
Lsat_s003.g0517.t1TETRASPANIN
Lsat_s003.g0518.t1
Lsat_s003.g0519.t1
Lsat_s003.g0520.t1
Lsat_s003.g0521.t1
Lsat_s003.g0522.t1
Lsat_s003.g0523.t1
Lsat_s003.g0524.t1LD39211P
Lsat_s003.g0525.t1RETROTRANSPOSON
Lsat_s003.g0526.t1
Lsat_s003.g0527.t1
Lsat_s003.g0528.t1RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Lsat_s003.g0529.t1ALPHA-1,2 MANNOSYLTRANSFERASE KTR1
Lsat_s003.g0530.t1RHO FAMILY GTPASE
Lsat_s003.g0531.t1CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP
Lsat_s003.g0532.t1
Lsat_s003.g0533.t1PYRUVATE KINASE
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