About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s003.g0384.t1LD39211P
Lsat_s003.g0385.t1TRANSMEMBRANE PROTEIN 256
Lsat_s003.g0386.t1ZNF44 PROTEIN
Lsat_s003.g0387.t1
Lsat_s003.g0388.t1
Lsat_s003.g0389.t1
Lsat_s003.g0390.t1
Lsat_s003.g0391.t1
Lsat_s003.g0392.t1
Lsat_s003.g0393.t1
Lsat_s003.g0394.t1
Lsat_s003.g0395.t1
Lsat_s003.g0396.t1
Lsat_s003.g0397.t1
Lsat_s003.g0398.t1
Lsat_s003.g0399.t1SHORT STATURE HOMEOBOX
Lsat_s003.g0400.t1CRUMBS FAMILY MEMBER
Lsat_s003.g0401.t1SLIT HOMOLOG
Lsat_s003.g0402.t1
Lsat_s003.g0403.t1CRUMBS FAMILY MEMBER
Lsat_s003.g0404.t1PA14 DOMAIN-CONTAINING PROTEIN
Lsat_s003.g0405.t1
Lsat_s003.g0406.t1CRUMBS FAMILY MEMBER
Lsat_s003.g0407.t1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
Lsat_s003.g0408.t1E3 UBIQUITIN-PROTEIN LIGASE TRIP12
Lsat_s003.g0409.t1SH2-SH3 ADAPTOR PROTEIN-RELATED
Lsat_s003.g0410.t1DIACYLGLYCEROL O-ACYLTRANSFERASE
Lsat_s003.g0411.t1CALPAIN
Lsat_s003.g0412.t1
Lsat_s003.g0413.t1
Lsat_s003.g0414.t1
Lsat_s003.g0415.t1
Lsat_s003.g0416.t1
Lsat_s003.g0417.t1MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 25
Lsat_s003.g0418.t1REPETIN
Lsat_s003.g0419.t1RAN GTPASE-ACTIVATING PROTEIN 1
Lsat_s003.g0420.t1CALPAIN
Lsat_s003.g0421.t1GLYCOSYLTRANSFERASE
Lsat_s003.g0422.t1
Lsat_s003.g0423.t1
Lsat_s003.g0424.t1
Lsat_s003.g0425.t1RGD1565685 PROTEIN
Lsat_s003.g0426.t1ARGINASE/AGMATINASE
Lsat_s003.g0427.t1
Lsat_s003.g0428.t1
Lsat_s003.g0429.t1FL(2)D-ASSOCIATED COMPLEX COMPONENT
Lsat_s003.g0430.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s003.g0431.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s003.g0432.t1
Lsat_s003.g0433.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
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