About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s003.g0534.t1
Lsat_s003.g0535.t1
Lsat_s003.g0536.t1RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
Lsat_s003.g0537.t1
Lsat_s003.g0538.t1
Lsat_s003.g0539.t1
Lsat_s003.g0540.t1
Lsat_s003.g0541.t1
Lsat_s003.g0542.t1
Lsat_s003.g0543.t1LEUCOKININ RECEPTOR-RELATED
Lsat_s003.g0544.t1G-PROTEIN COUPLED RECEPTOR
Lsat_s003.g0545.t1
Lsat_s003.g0546.t1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Lsat_s003.g0547.t1AB HYDROLASE SUPERFAMILY PROTEIN C4A8.06C
Lsat_s003.g0548.t1
Lsat_s003.g0549.t1UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
Lsat_s003.g0550.t1UDP-D-XYLOSE:L-FUCOSE ALPHA-1,3-D-XYLOSYLTRANSFERASE-RELATED
Lsat_s003.g0551.t1
Lsat_s003.g0552.t1
Lsat_s003.g0553.t1CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Lsat_s003.g0554.t1
Lsat_s003.g0555.t1
Lsat_s003.g0556.t1
Lsat_s003.g0557.t1
Lsat_s003.g0558.t1
Lsat_s003.g0559.t1GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
Lsat_s003.g0560.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s003.g0561.t1AGAP006772-PA
Lsat_s003.g0562.t1
Lsat_s003.g0563.t1
Lsat_s003.g0564.t1
Lsat_s003.g0565.t1UV RADIATION RESISTANCE-ASSOCIATED GENE PROTEIN
Lsat_s003.g0566.t1
Lsat_s003.g0567.t1
Lsat_s003.g0568.t1
Lsat_s003.g0569.t1ENVOPLAKIN
Lsat_s003.g0570.t1GOLGI AUTOANTIGEN, GOLGIN SUBFAMILY A, 7
Lsat_s003.g0571.t1SERINE INCORPORATOR
Lsat_s003.g0572.t1
Lsat_s003.g0573.t1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Lsat_s003.g0574.t1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Lsat_s003.g0575.t1
Lsat_s003.g0576.t1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Lsat_s003.g0577.t1
Lsat_s003.g0578.t1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Lsat_s003.g0579.t1ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCA
Lsat_s003.g0580.t1SYNOVIAL SARCOMA, X MEMBER
Lsat_s003.g0581.t1GLYPICAN
Lsat_s003.g0582.t1PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Lsat_s003.g0583.t1GLYPICAN
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