Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Lamellibrachia satsuma | Annelida | tube worms | Cold seep | 110 | Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE) | 104711 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
ASM3323900v1 | 736Mb | Scaffold | 2023 | BSQZ01 | Atmosphere and Ocean Research Institute, The University of Tokyo | PRJDB14199 | 95.50% | 27,979 |
Title | Journal | Pubmed ID |
---|---|---|
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsuma | DNA Research | 37358253 |
Gene ID | Description |
---|---|
Lsat_s004.g0086.t1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 22 |
Lsat_s004.g0087.t1 | |
Lsat_s004.g0088.t1 | |
Lsat_s004.g0089.t1 | SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN |
Lsat_s004.g0090.t1 | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED |
Lsat_s004.g0091.t1 | |
Lsat_s004.g0092.t1 | |
Lsat_s004.g0093.t1 | RYBP AND YAF2-RELATED |
Lsat_s004.g0094.t1 | UBIQUITIN CARBOXYL-TERMINAL HYDROLASE |
Lsat_s004.g0095.t1 | STEROL ISOMERASE |
Lsat_s004.g0096.t1 | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED |
Lsat_s004.g0097.t1 | |
Lsat_s004.g0098.t1 | |
Lsat_s004.g0099.t1 | USP DOMAIN-CONTAINING PROTEIN |
Lsat_s004.g0100.t1 | |
Lsat_s004.g0101.t1 | |
Lsat_s004.g0102.t1 | |
Lsat_s004.g0103.t1 | CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA |
Lsat_s004.g0104.t1 | |
Lsat_s004.g0105.t1 | CALCIUM-ACTIVATED POTASSIUM CHANNEL SUBUNIT BETA |
Lsat_s004.g0106.t1 | |
Lsat_s004.g0107.t1 | ROUND SPERMATID BASIC PROTEIN 1 |
Lsat_s004.g0108.t1 | TESTIS-SPECIFIC Y-ENCODED PROTEIN |
Lsat_s004.g0109.t1 | PLEXIN |
Lsat_s004.g0110.t1 | N-ACETYLGLUCOSAMINE-6-SULFATASE FAMILY MEMBER |
Lsat_s004.g0111.t1 | POL PROTEIN |
Lsat_s004.g0112.t1 | ZINC FINGER MYND DOMAIN CONTAINING PROTEIN 10 |
Lsat_s004.g0113.t1 | HIGH MOBILITY GROUP B PROTEIN 4-RELATED |
Lsat_s004.g0114.t1 | |
Lsat_s004.g0115.t1 | RASSF |
Lsat_s004.g0116.t1 | TUMOR SUPPRESSOR CANDIDATE 2 |
Lsat_s004.g0117.t1 | DALRD3 PROTEIN |
Lsat_s004.g0118.t1 | GRAM DOMAIN-CONTAINING PROTEIN 4 |
Lsat_s004.g0119.t1 | |
Lsat_s004.g0120.t1 | |
Lsat_s004.g0121.t1 | |
Lsat_s004.g0122.t1 | GRAM DOMAIN-CONTAINING PROTEIN 4 |
Lsat_s004.g0123.t1 | RAB FAMILY |
Lsat_s004.g0124.t1 | PROTEIN-LYSINE N-METHYLTRANSFERASE METTL10 |
Lsat_s004.g0125.t1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED |
Lsat_s004.g0126.t1 | SOLUTE CARRIER FAMILY 33 ACETYL-COA TRANSPORTER -RELATED |
Lsat_s004.g0127.t1 | |
Lsat_s004.g0128.t1 | PROTEIN CBG26694 |
Lsat_s004.g0129.t1 | |
Lsat_s004.g0130.t1 | DYNEIN HEAVY CHAIN |
Lsat_s004.g0131.t1 | |
Lsat_s004.g0132.t1 | CELL DIVISION PROTEIN KINASE |
Lsat_s004.g0133.t1 | SOLUTE CARRIER FAMILY 35 MEMBER B |
Lsat_s004.g0134.t1 | DEOXYRIBONUCLEASE TATDN2-RELATED |
Lsat_s004.g0135.t1 | - |