About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_48467-0.0ANKYRIN DOMAIN-CONTAINING
Bpl_scaf_48467-0.11ANKYRIN REPEAT FAMILY PROTEIN
Bpl_scaf_48467-0.7
Bpl_scaf_48467-0.8PTD012 PROTEIN
Bpl_scaf_48473-0.0
Bpl_scaf_48474-0.0
Bpl_scaf_48474-0.6
Bpl_scaf_48474-1.1
Bpl_scaf_48474-1.3
Bpl_scaf_48474-2.9
Bpl_scaf_48474-4.6NUCLEAR HORMONE RECEPTOR
Bpl_scaf_48489-0.7NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
Bpl_scaf_48499-0.3HEAT SHOCK PROTEIN 70KDA
Bpl_scaf_48499-0.5HEAT SHOCK PROTEIN 70KDA
Bpl_scaf_48499-0.8BIOGENESIS OF LYSOSOME-RELATED ORGANELLES COMPLEX 1 SUBUNIT 3
Bpl_scaf_48512-0.10
Bpl_scaf_48512-0.12DYNEIN LIGHT INTERMEDIATE CHAIN
Bpl_scaf_48512-0.15ANKYRIN REPEAT FAMILY PROTEIN
Bpl_scaf_48518-0.13POLYCYSTIN FAMILY MEMBER
Bpl_scaf_48527-0.3
Bpl_scaf_48528-2.0CARBOHYDRATE SULFOTRANSFERASE
Bpl_scaf_48528-2.3
Bpl_scaf_48528-2.5ACETYLCHOLINESTERASE
Bpl_scaf_48528-3.7
Bpl_scaf_48528-4.1
Bpl_scaf_48528-5.17PROTEIN TORNADO 1
Bpl_scaf_48528-5.9
Bpl_scaf_48529-0.11
Bpl_scaf_48529-0.15
Bpl_scaf_48529-0.18
Bpl_scaf_48538-0.23
Bpl_scaf_48538-0.24
Bpl_scaf_48538-0.25
Bpl_scaf_48562-0.5-
Bpl_scaf_48569-0.2
Bpl_scaf_48577-0.0
Bpl_scaf_48578-0.3OLIGOPEPTIDE TRANSPORTER-RELATED
Bpl_scaf_48578-1.5ANION EXCHANGE PROTEIN
Bpl_scaf_48578-2.17BONUS, ISOFORM C-RELATED
Bpl_scaf_48578-2.5BONUS, ISOFORM C-RELATED
Bpl_scaf_48578-2.8TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)
Bpl_scaf_48578-6.43
Bpl_scaf_48578-6.44
Bpl_scaf_48578-6.45OS10G0105400 PROTEIN
Bpl_scaf_48578-6.46OS10G0105400 PROTEIN
Bpl_scaf_48578-6.48
Bpl_scaf_48578-6.50COLLAGEN ALPHA
Bpl_scaf_48578-6.51COLLAGEN ALPHA
Bpl_scaf_48581-0.7PROPERDIN
Bpl_scaf_48589-0.6
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