About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_48590-1.4PRE-MRNA SPLICING FACTOR
Bpl_scaf_48590-1.52-AMINOMUCONIC SEMIALDEHYDE DEHYDROGENASE
Bpl_scaf_48590-1.6HRAS-LIKE SUPPRESSOR - RELATED
Bpl_scaf_48590-2.17
Bpl_scaf_48590-2.19
Bpl_scaf_48590-2.2
Bpl_scaf_48590-3.12INHIBITOR OF APOPTOSIS
Bpl_scaf_48590-3.14
Bpl_scaf_48590-3.15
Bpl_scaf_48590-5.17DYNEIN HEAVY CHAIN FAMILY PROTEIN
Bpl_scaf_48590-5.18DYNEIN HEAVY CHAIN FAMILY PROTEIN
Bpl_scaf_48590-6.0BETA-SITE APP-CLEAVING ENZYME, ISOFORM A-RELATED
Bpl_scaf_48590-6.31
Bpl_scaf_48590-6.6GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
Bpl_scaf_48590-6.7
Bpl_scaf_48595-0.5GTPASE, IMAP FAMILY MEMBER-RELATED
Bpl_scaf_48595-0.9
Bpl_scaf_48609-0.1FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_48609-0.10
Bpl_scaf_48609-0.11THROMBOSPONDIN TYPE I DOMAIN-CONTAINING 1
Bpl_scaf_48609-0.3
Bpl_scaf_48626-0.13
Bpl_scaf_48626-0.14
Bpl_scaf_48626-0.21
Bpl_scaf_48626-0.22TITIN
Bpl_scaf_48626-0.24
Bpl_scaf_48639-0.0
Bpl_scaf_48639-0.1
Bpl_scaf_48639-0.5
Bpl_scaf_48639-0.9
Bpl_scaf_48650-0.12HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2
Bpl_scaf_48650-0.13ACETYL-COA C-ACETYLTRANSFERASE
Bpl_scaf_48650-0.8-
Bpl_scaf_48650-0.9FORKHEAD BOX PROTEIN
Bpl_scaf_48665-0.13
Bpl_scaf_48665-0.6
Bpl_scaf_48665-0.7VON WILLEBRAND FACTOR A DOMAIN-CONTAINING PROTEIN 5A
Bpl_scaf_48682-0.17UNCHARACTERIZED
Bpl_scaf_48682-0.18UNCHARACTERIZED
Bpl_scaf_48682-0.31RHO FAMILY GTPASE
Bpl_scaf_48682-0.32
Bpl_scaf_48682-0.34UNCHARACTERIZED
Bpl_scaf_48682-0.36CEREBELLIN-RELATED
Bpl_scaf_48695-0.10PALMITOYLTRANSFERASE ZDHHC16
Bpl_scaf_48695-0.8UBX DOMAIN-CONTAINING PROTEIN 1
Bpl_scaf_48701-0.0
Bpl_scaf_48701-0.1
Bpl_scaf_48701-0.13
Bpl_scaf_48701-0.15
Bpl_scaf_48701-0.2
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