About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_48243-1.7CYTOCHROME C OXIDASE ASSEMBLY FACTOR 5
Bpl_scaf_48243-2.0
Bpl_scaf_48243-2.13
Bpl_scaf_48243-2.28
Bpl_scaf_48243-2.29
Bpl_scaf_48243-2.30
Bpl_scaf_48243-3.14
Bpl_scaf_48243-3.18
Bpl_scaf_48243-3.30
Bpl_scaf_48243-3.33
Bpl_scaf_48243-3.34
Bpl_scaf_48243-3.35
Bpl_scaf_48244-0.1ACROSIN-RELATED
Bpl_scaf_48251-0.4WD40 REPEAT PROTEIN
Bpl_scaf_48251-1.22PROTEASOME ASSEMBLY CHAPERONE 3
Bpl_scaf_48251-1.23PAK1 INTERACTING PROTEIN 1
Bpl_scaf_48251-1.24CEREBELLIN-RELATED
Bpl_scaf_48251-1.8TYROSINE-PROTEIN KINASE RECEPTOR
Bpl_scaf_48251-2.11RIBULOKINASE
Bpl_scaf_48251-2.12RAN BINDING PROTEIN
Bpl_scaf_48251-2.17TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED
Bpl_scaf_48251-2.20WD40 REPEAT PROTEIN
Bpl_scaf_48251-2.6METHYLTRANSFERASE LIKE 7B
Bpl_scaf_48251-3.11LEUCOKININ RECEPTOR-RELATED
Bpl_scaf_48251-3.13UNHEALTHY RIBOSOME BIOGENESIS PROTEIN 2 HOMOLOG
Bpl_scaf_48251-3.14
Bpl_scaf_48253-0.0
Bpl_scaf_48253-0.2REVERSE TRANSCRIPTASE
Bpl_scaf_48254-0.0
Bpl_scaf_48254-0.1
Bpl_scaf_48255-0.3
Bpl_scaf_48255-0.6
Bpl_scaf_48260-0.0
Bpl_scaf_48261-0.1
Bpl_scaf_48261-0.10
Bpl_scaf_48261-0.11
Bpl_scaf_48261-0.12
Bpl_scaf_48261-0.14
Bpl_scaf_48261-0.2
Bpl_scaf_48261-0.21
Bpl_scaf_48261-1.10TGF-BETA FAMILY
Bpl_scaf_48261-1.42-AMINO-3-CARBOXYLMUCONATE-6-SEMIALDEHYDE DECARBOXYLASE
Bpl_scaf_48261-3.10GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2
Bpl_scaf_48261-3.18TRNA N6-ADENOSINE THREONYLCARBAMOYLTRANSFERASE
Bpl_scaf_48261-3.20GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE
Bpl_scaf_48262-0.17SOLUTE CARRIER FAMILY 22 MEMBER
Bpl_scaf_48262-0.27TUBULIN POLYGLUTAMYLASE
Bpl_scaf_48262-1.3G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_48262-1.5YY1 ASSOCIATED PROTEIN-RELATED
Bpl_scaf_48262-10.3UNCHARACTERIZED
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