About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_47857-0.0
Bpl_scaf_47857-0.1
Bpl_scaf_47857-0.8
Bpl_scaf_4786-0.1
Bpl_scaf_47881-0.0ZINC FINGER PROTEIN
Bpl_scaf_47881-0.4CYCLIC NUCLEOTIDE-GATED CATION CHANNEL SUBUNIT A
Bpl_scaf_47891-0.2SACSIN
Bpl_scaf_47891-0.3SACSIN
Bpl_scaf_479-0.20ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_479-0.21CYTOCHROME P450 508A4-RELATED
Bpl_scaf_479-0.22DYNEIN HEAVY CHAIN
Bpl_scaf_479-0.30DYNEIN HEAVY CHAIN FAMILY PROTEIN
Bpl_scaf_479-0.32NINJURIN-RELATED
Bpl_scaf_479-0.33NINJURIN-RELATED
Bpl_scaf_47902-0.0
Bpl_scaf_47902-0.10
Bpl_scaf_47902-0.4
Bpl_scaf_47911-0.12
Bpl_scaf_47911-0.13
Bpl_scaf_47911-0.18CARCINOEMBRYONIC ANTIGEN-RELATED CELL ADHESION MOLECULE 8
Bpl_scaf_47915-0.0
Bpl_scaf_47923-0.1BONUS, ISOFORM C-RELATED
Bpl_scaf_47923-0.17FI04643P-RELATED
Bpl_scaf_47923-0.18
Bpl_scaf_47933-0.24POLYCYSTIN FAMILY MEMBER
Bpl_scaf_47933-0.28POLYCYSTIN-1
Bpl_scaf_47933-0.29POLYCYSTIN FAMILY MEMBER
Bpl_scaf_47937-0.3G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_47937-0.5-
Bpl_scaf_47953-0.20FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_47953-0.21FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_47967-0.10
Bpl_scaf_47967-0.13EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED
Bpl_scaf_47977-0.4REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_47977-0.9
Bpl_scaf_47978-0.11
Bpl_scaf_47978-0.16PROTEIN STAR
Bpl_scaf_47978-0.26
Bpl_scaf_47978-0.31UNCHARACTERIZED
Bpl_scaf_47978-0.32
Bpl_scaf_47986-0.25
Bpl_scaf_47986-0.31
Bpl_scaf_47993-0.1DESMOGLEIN FAMILY MEMBER
Bpl_scaf_47993-0.12ZINC FINGER PROTEIN
Bpl_scaf_47993-0.4ZINC FINGER PROTEIN 200
Bpl_scaf_48004-0.4BONUS, ISOFORM C-RELATED
Bpl_scaf_48004-0.6
Bpl_scaf_48004-0.8BONUS, ISOFORM C-RELATED
Bpl_scaf_48014-0.11LD39211P
Bpl_scaf_48014-0.1214-3-3 PROTEIN
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