About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_47430-1.6PROTEIN TORNADO 1
Bpl_scaf_47430-2.0
Bpl_scaf_47430-2.2NEUROTRANSMITTER GATED ION CHANNEL
Bpl_scaf_47430-2.5PKSB
Bpl_scaf_47430-2.6
Bpl_scaf_47430-3.1060S RIBOSOMAL PROTEIN L7
Bpl_scaf_47430-3.65'(3')-DEOXYRIBONUCLEOTIDASE
Bpl_scaf_47430-5.4
Bpl_scaf_47430-5.5RETINOL DEHYDROGENASE
Bpl_scaf_47430-5.7UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Bpl_scaf_47430-6.0TRANSCRIPTION FACTOR MAF
Bpl_scaf_47430-7.0
Bpl_scaf_47430-7.15NEUROMODULIN
Bpl_scaf_47430-7.16IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_47430-7.8PEROXISOMAL BIOGENESIS FACTOR 19
Bpl_scaf_47430-8.13UPF0722 PROTEIN C11ORF88
Bpl_scaf_47430-8.6MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Bpl_scaf_47430-9.34MULTI-COPPER OXIDASE
Bpl_scaf_47430-9.8AAA DOMAIN-CONTAINING
Bpl_scaf_47430-9.9ZINC FINGER PROTEIN 200
Bpl_scaf_47439-0.2ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Bpl_scaf_47439-0.4CYSTATHIONINE BETA-SYNTHASE
Bpl_scaf_47439-1.8IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_47439-1.9TYROSINE-PROTEIN KINASE RECEPTOR
Bpl_scaf_47439-2.10
Bpl_scaf_47439-2.11
Bpl_scaf_47439-2.13INTIMAL THICKNESS RECEPTOR-RELATED
Bpl_scaf_47439-2.22CTX-RELATED TYPE I TRANSMEMBRANE PROTEIN
Bpl_scaf_47439-2.23CONTACTIN 5
Bpl_scaf_47439-2.5CONTACTIN 5
Bpl_scaf_47442-0.2
Bpl_scaf_47449-0.7
Bpl_scaf_47449-1.0
Bpl_scaf_47449-2.0
Bpl_scaf_47449-2.18PROTEIN TORNADO 1
Bpl_scaf_47449-2.2
Bpl_scaf_47449-2.20
Bpl_scaf_4745-0.6
Bpl_scaf_4745-1.14
Bpl_scaf_4745-1.36
Bpl_scaf_4745-1.40
Bpl_scaf_4745-1.41
Bpl_scaf_4745-1.42
Bpl_scaf_4745-1.45
Bpl_scaf_4745-1.49
Bpl_scaf_4752-0.0BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_4752-0.2
Bpl_scaf_4752-1.1
Bpl_scaf_4752-1.10
Bpl_scaf_4752-1.7
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