About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_4775-1.9GH03947P
Bpl_scaf_47755-0.17INTEGRIN ALPHA
Bpl_scaf_47755-0.18INTEGRIN ALPHA
Bpl_scaf_47755-0.19INTEGRIN ALPHA
Bpl_scaf_47755-1.1BONUS, ISOFORM C-RELATED
Bpl_scaf_47755-1.5BONUS, ISOFORM C-RELATED
Bpl_scaf_47755-1.9INTEGRIN ALPHA
Bpl_scaf_47755-2.0BONUS, ISOFORM C-RELATED
Bpl_scaf_47755-2.6INTEGRIN ALPHA
Bpl_scaf_47755-4.10BONUS, ISOFORM C-RELATED
Bpl_scaf_47755-4.12INTEGRIN ALPHA
Bpl_scaf_47755-4.13INTEGRIN ALPHA
Bpl_scaf_47755-5.14BONUS, ISOFORM C-RELATED
Bpl_scaf_47755-5.20INTEGRIN ALPHA
Bpl_scaf_47755-5.21BONUS, ISOFORM C-RELATED
Bpl_scaf_47755-5.22INTEGRIN ALPHA
Bpl_scaf_47761-0.0
Bpl_scaf_47761-0.2
Bpl_scaf_47761-0.3
Bpl_scaf_47797-0.15
Bpl_scaf_47797-0.16RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_47805-0.6ELECTRON TRANSPORT OXIDOREDUCTASE
Bpl_scaf_4781-0.0
Bpl_scaf_47814-0.10
Bpl_scaf_47814-0.4
Bpl_scaf_47814-0.9ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_47818-0.5PROBABLE PHOSPHOLIPID-TRANSPORTING ATPASE
Bpl_scaf_47818-0.6
Bpl_scaf_47827-1.11
Bpl_scaf_47827-1.6DIPHOSPHOINOSITOL PENTAKISPHOSPHATE KINASE
Bpl_scaf_47827-1.7DIPHOSPHOINOSITOL PENTAKISPHOSPHATE KINASE
Bpl_scaf_47827-2.6COLLAGEN ALPHA
Bpl_scaf_47827-2.7
Bpl_scaf_47827-3.0GTPASE, IMAP FAMILY MEMBER-RELATED
Bpl_scaf_47827-3.17
Bpl_scaf_47827-3.18
Bpl_scaf_47827-3.3
Bpl_scaf_47827-4.17COLLAGEN ALPHA
Bpl_scaf_47827-4.2COLLAGEN ALPHA
Bpl_scaf_47827-5.13
Bpl_scaf_47827-5.15
Bpl_scaf_47827-5.8COLLAGEN ALPHA
Bpl_scaf_47833-0.4ENGULFMENT AND CELL MOTILITY
Bpl_scaf_4784-0.5PROTEIN HAPLESS 2
Bpl_scaf_4784-1.12ACTIN
Bpl_scaf_4784-1.14EUKARYOTIC TRANSLATION INITIATION FACTOR
Bpl_scaf_4784-1.40KINESIN LIGHT CHAIN
Bpl_scaf_4784-1.41PROTEIN CBG16200
Bpl_scaf_4784-1.42PROTEIN CBG16200
Bpl_scaf_47847-0.5
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