About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_48108-0.23'-5' EXONUCLEASE ERI1-RELATED
Bpl_scaf_48108-1.11FORMIN-LIKE PROTEIN
Bpl_scaf_48108-1.14N-ALPHA-ACETYLTRANSFERASE 60
Bpl_scaf_48108-1.20
Bpl_scaf_48108-1.23RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED
Bpl_scaf_48108-1.24UNCHARACTERIZED
Bpl_scaf_48108-1.25
Bpl_scaf_48108-1.27RIBOSOMAL RNA PROCESSING PROTEIN 7-RELATED
Bpl_scaf_48112-0.4
Bpl_scaf_48112-1.12TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Bpl_scaf_48112-1.13TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6
Bpl_scaf_48112-1.16
Bpl_scaf_48112-1.17
Bpl_scaf_48125-0.8ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE
Bpl_scaf_48125-1.16ZGC:174356
Bpl_scaf_48125-1.19ZGC:174356
Bpl_scaf_48125-1.20ZGC:174356
Bpl_scaf_48125-1.24GEO07743P1
Bpl_scaf_48125-1.25ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_48133-0.11
Bpl_scaf_48133-1.20
Bpl_scaf_48133-1.23
Bpl_scaf_48133-1.29DED DOMAIN-CONTAINING PROTEIN
Bpl_scaf_48136-0.5
Bpl_scaf_48139-0.1SLR5058 PROTEIN
Bpl_scaf_48139-0.6
Bpl_scaf_48139-1.16AGAP005574-PA
Bpl_scaf_48139-1.18REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_48139-1.2COPINE
Bpl_scaf_48139-1.33
Bpl_scaf_48139-1.39LD33804P
Bpl_scaf_48139-1.4GEO11419P1
Bpl_scaf_48145-0.0
Bpl_scaf_48145-1.0BONUS, ISOFORM C-RELATED
Bpl_scaf_48145-1.12FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_48146-0.0GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Bpl_scaf_48146-0.15
Bpl_scaf_48146-0.16
Bpl_scaf_48146-0.17
Bpl_scaf_48146-0.18
Bpl_scaf_48146-0.19GRB2-ASSOCIATED AND REGULATOR OF MAPK PROTEIN FAMILY MEMBER
Bpl_scaf_48146-1.2DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Bpl_scaf_48146-1.5DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Bpl_scaf_48146-2.14BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED
Bpl_scaf_48146-2.15G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_48146-2.9UNCHARACTERIZED
Bpl_scaf_48153-0.0PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_48156-1.11VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_48156-1.12CENTROMERE PROTEIN E
Bpl_scaf_48156-1.13FERRITIN
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