About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

<< First 409 410 411 412 413 414 415 416 417 418 Forward> Last>>        672 pages in total

Gene IDDescription
Bpl_scaf_48156-2.1
Bpl_scaf_48156-2.12ARCHAEMETZINCIN
Bpl_scaf_48156-2.13HELICASE WITH DEATH DOMAIN-RELATED
Bpl_scaf_48156-2.18
Bpl_scaf_48156-2.5PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_48161-1.14BONUS, ISOFORM C-RELATED
Bpl_scaf_48161-1.16CRUMBS FAMILY MEMBER
Bpl_scaf_48161-1.42CDGSH IRON SULFUR DOMAIN PROTEIN HOMOLOG
Bpl_scaf_48161-1.43UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
Bpl_scaf_48161-2.1BONUS, ISOFORM C-RELATED
Bpl_scaf_48161-2.2BONUS, ISOFORM C-RELATED
Bpl_scaf_48161-2.23BONUS, ISOFORM C-RELATED
Bpl_scaf_48161-2.24KH DOMAIN CONTAINING RNA BINDING PROTEIN
Bpl_scaf_48161-2.4BONUS, ISOFORM C-RELATED
Bpl_scaf_48168-0.3
Bpl_scaf_48175-0.0
Bpl_scaf_48176-0.2
Bpl_scaf_48176-1.6THIOREDOXIN-LIKE PROTEIN 1
Bpl_scaf_48176-2.2PROPERDIN
Bpl_scaf_48176-2.3TOLL-LIKE RECEPTOR
Bpl_scaf_48176-2.8
Bpl_scaf_48177-0.2CHORDIN
Bpl_scaf_4818-0.0ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_48180-0.3COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED
Bpl_scaf_48182-0.1
Bpl_scaf_48186-0.11UNCHARACTERIZED
Bpl_scaf_48186-0.12-
Bpl_scaf_48186-0.7T-CELL ACTIVATION INHIBITOR, MITOCHONDRIAL
Bpl_scaf_48186-1.6SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN
Bpl_scaf_48186-1.7ATP-DEPENDENT RNA HELICASE
Bpl_scaf_48186-1.8ATP-DEPENDENT RNA HELICASE
Bpl_scaf_48186-2.12
Bpl_scaf_48186-2.4TOLL-LIKE RECEPTOR
Bpl_scaf_48186-2.8
Bpl_scaf_48189-0.2BASIGIN RELATED
Bpl_scaf_48191-0.2
Bpl_scaf_48196-0.0PATHOGENESIS-RELATED FAMILY PROTEIN
Bpl_scaf_48197-0.20TRANSPOSON
Bpl_scaf_48197-0.21CEREBELLIN-RELATED
Bpl_scaf_48197-0.22TUBULIN
Bpl_scaf_48197-0.23YDJC DEACETYLASE FAMILY MEMBER
Bpl_scaf_48197-0.2439A RIBOSOMAL PROTEIN L50, MITOCHONDRIAL
Bpl_scaf_48197-1.10SLINGSHOT PROTEIN PHOSPHATASE HOMOLOG
Bpl_scaf_48197-1.11EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 5
Bpl_scaf_48197-2.11BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_48197-2.25BTB/POZ DOMAIN-CONTAINING
Bpl_scaf_48197-2.27MYOSIN HEAVY CHAIN, NON-MUSCLE
Bpl_scaf_48197-2.28MYOSIN HEAVY CHAIN, NON-MUSCLE
Bpl_scaf_48197-2.29MYOSIN
Bpl_scaf_48197-2.8PDZ DOMAIN CONTAINING PROTEIN
TOP