About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_48014-0.14OS10G0105400 PROTEIN
Bpl_scaf_48014-0.17UNCHARACTERIZED
Bpl_scaf_48014-0.32METHYLENETETRAHYDROFOLATE REDUCTASE
Bpl_scaf_48023-0.1G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_48023-0.10KRAB AND ZINC FINGER DOMAIN-CONTAINING
Bpl_scaf_48023-0.12RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_48023-0.4RAS-ASSOCIATING DOMAIN-CONTAINING PROTEIN
Bpl_scaf_48023-0.6G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_48026-0.0
Bpl_scaf_48036-0.8CYCLINS
Bpl_scaf_4804-1.3FOUR-JOINTED BOX PROTEIN 1
Bpl_scaf_48043-0.13LD11652P
Bpl_scaf_48043-0.14FACIOGENITAL DYSPLASIA PROTEIN
Bpl_scaf_4806-0.2
Bpl_scaf_48061-0.13TOLL-LIKE RECEPTOR
Bpl_scaf_48061-0.19
Bpl_scaf_48061-0.21CERAMIDE GLUCOSYLTRANSFERASE
Bpl_scaf_48061-0.31
Bpl_scaf_48061-0.32
Bpl_scaf_48072-0.17LD33804P
Bpl_scaf_48072-0.4SODIUM-COUPLED MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_48072-1.18HYDROXYSTEROID DEHYDROGENASE-LIKE PROTEIN 2
Bpl_scaf_48072-1.19PHOSPHOMANNOMUTASE 45A
Bpl_scaf_48072-1.20BONUS, ISOFORM C-RELATED
Bpl_scaf_48072-1.4THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED
Bpl_scaf_4808-0.12
Bpl_scaf_4808-0.3THIOPURINE S-METHYLTRANSFERASE
Bpl_scaf_4808-1.7MAP/MICROTUBULE AFFINITY-REGULATING KINASE
Bpl_scaf_4808-1.8
Bpl_scaf_4808-1.9
Bpl_scaf_4808-2.1PROMININ PROM PROTEIN
Bpl_scaf_4808-2.18AQUAPORIN TRANSPORTER
Bpl_scaf_4808-2.6DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE 5-RELATED
Bpl_scaf_4808-2.7PROMININ PROM PROTEIN
Bpl_scaf_48086-0.0
Bpl_scaf_48086-0.14
Bpl_scaf_48086-0.15
Bpl_scaf_48086-0.2ANKYRIN REPEAT FAMILY PROTEIN
Bpl_scaf_48086-0.9
Bpl_scaf_48086-1.0
Bpl_scaf_48086-1.5ANKYRIN REPEAT-CONTAINING
Bpl_scaf_48092-0.15PROPERDIN
Bpl_scaf_48092-0.16PROPERDIN
Bpl_scaf_48092-1.13
Bpl_scaf_48092-1.14PROPERDIN
Bpl_scaf_48092-1.6
Bpl_scaf_48092-1.8
Bpl_scaf_48094-0.0
Bpl_scaf_48098-0.0
Bpl_scaf_48102-0.1
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