About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_1-0.2ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_1-0.7ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_10008-0.26
Bpl_scaf_10008-0.27
Bpl_scaf_10008-0.29
Bpl_scaf_10008-0.32EGF-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_10008-0.33
Bpl_scaf_1001-0.6CEREBELLIN-RELATED
Bpl_scaf_1001-0.7CEREBELLIN-RELATED
Bpl_scaf_10020-0.20XAA-PRO AMINOPEPTIDASE 1
Bpl_scaf_10020-0.23
Bpl_scaf_10020-0.25
Bpl_scaf_10020-0.26ANDROGLOBIN
Bpl_scaf_10028-0.14CARBONIC ANHYDRASE
Bpl_scaf_10028-0.17NNMT/PNMT/TEMT FAMILY MEMBER
Bpl_scaf_10028-0.29MITOGEN-ACTIVATED PROTEIN KINASE
Bpl_scaf_10028-0.3SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_10028-0.4SRCR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_10028-0.7
Bpl_scaf_10036-0.11LYSYL OXIDASE-LIKE-RELATED
Bpl_scaf_10036-0.12LIPID PHOSPHATE PHOSPHATASE
Bpl_scaf_10036-0.13WD REPEAT-CONTAINING PROTEIN 11
Bpl_scaf_10036-0.25
Bpl_scaf_10047-0.3MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2
Bpl_scaf_10055-0.9DYNEIN HEAVY CHAIN
Bpl_scaf_10055-1.18SLIT HOMOLOG
Bpl_scaf_10055-1.19HYR DOMAIN-CONTAINING PROTEIN
Bpl_scaf_10062-0.12SPERM-SPECIFIC FAMILY, CLASS Q
Bpl_scaf_10062-0.13
Bpl_scaf_10062-0.3
Bpl_scaf_10062-0.7BONUS, ISOFORM C-RELATED
Bpl_scaf_10062-1.0
Bpl_scaf_10062-1.10PAK1 INTERACTING PROTEIN 1
Bpl_scaf_10062-1.13
Bpl_scaf_10062-1.14TRANSMEMBRANE PROTEIN 14, 15
Bpl_scaf_10068-0.0
Bpl_scaf_10068-0.9
Bpl_scaf_10068-1.11EXPRESSED PROTEIN
Bpl_scaf_10068-1.13
Bpl_scaf_10068-1.14
Bpl_scaf_10068-1.16
Bpl_scaf_10068-1.17
Bpl_scaf_1008-0.1
Bpl_scaf_10080-0.3GUANINE NUCLEOTIDE-BINDING PROTEIN BETA G PROTEIN BETA
Bpl_scaf_10080-1.2SERINE-THREONINE PROTEIN KINASE
Bpl_scaf_10080-1.23
Bpl_scaf_10080-1.4
Bpl_scaf_10080-1.5
Bpl_scaf_10091-0.0PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Bpl_scaf_10093-0.2DYNEIN HEAVY CHAIN
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