About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_4822-2.13
Bpl_scaf_4822-2.14SPRY DOMAIN CONTAINING SOCS BOX PROTEIN
Bpl_scaf_4822-2.15COILED-COIL DOMAIN-CONTAINING PROTEIN 57
Bpl_scaf_4822-2.5
Bpl_scaf_48229-0.3RETINOBLASTOMA-ASSOCIATED PROTEIN RB -RELATED
Bpl_scaf_48229-1.1MSF1/PX19 RELATED
Bpl_scaf_48229-2.15ZINC FINGER PROTEIN 142
Bpl_scaf_48229-2.19LOC361192
Bpl_scaf_48229-2.22
Bpl_scaf_48229-2.24DLEC1 DELETED IN LUNG AND ESOPHAGEAL CANCER 1
Bpl_scaf_48229-2.34RING FINGER PROTEIN 141-RELATED
Bpl_scaf_48229-2.35UNCHARACTERIZED
Bpl_scaf_48230-0.4
Bpl_scaf_48230-0.7
Bpl_scaf_48231-1.14
Bpl_scaf_48231-1.15HISTONE H2A
Bpl_scaf_48231-2.6MESODERM DEVELOPMENT CANDIDATE 2
Bpl_scaf_48231-2.7-
Bpl_scaf_48231-3.13
Bpl_scaf_48231-3.7SIN3B-RELATED
Bpl_scaf_48231-4.0
Bpl_scaf_48231-4.10SMAD
Bpl_scaf_48232-0.11
Bpl_scaf_48232-0.12MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_48232-0.7
Bpl_scaf_48232-1.10TRANSMEMBRANE PROTEIN 181
Bpl_scaf_48232-10.1FATTY ACID SYNTHASE
Bpl_scaf_48232-10.10THAP DOMAIN-CONTAINING
Bpl_scaf_48232-10.7
Bpl_scaf_48232-10.8
Bpl_scaf_48232-3.25DYNEIN HEAVY CHAIN 1, AXONEMAL-LIKE PROTEIN
Bpl_scaf_48232-3.31MALE FERTILITY FACTOR KL5
Bpl_scaf_48232-4.2
Bpl_scaf_48232-5.10EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN
Bpl_scaf_48232-5.12EPIDERMAL GROWTH FACTOR RECEPTOR KINASE SUBSTRATE EPS8-RELATED PROTEIN
Bpl_scaf_48232-5.22
Bpl_scaf_48232-5.6
Bpl_scaf_48232-5.9CEREBELLIN-RELATED
Bpl_scaf_48232-6.14
Bpl_scaf_48232-6.15UNCHARACTERIZED
Bpl_scaf_48232-6.8GLYCOSYLTRANSFERASE-RELATED
Bpl_scaf_48232-7.0CEREBELLIN-RELATED
Bpl_scaf_48233-0.0BACILLOLYSIN
Bpl_scaf_48237-0.0COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Bpl_scaf_48238-0.0G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_48239-0.1REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_48243-0.3ZGC:162509
Bpl_scaf_48243-0.4ZGC:162509
Bpl_scaf_48243-0.7
Bpl_scaf_48243-1.6CHROMOSOME-ASSOCIATED KINESIN KIF4A-RELATED
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