About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_4705-0.21
Bpl_scaf_4705-0.22
Bpl_scaf_4705-0.4
Bpl_scaf_4705-0.8
Bpl_scaf_47051-0.11
Bpl_scaf_47051-0.12
Bpl_scaf_47051-0.3
Bpl_scaf_47073-0.7ARMADILLO-TYPE FOLD-RELATED
Bpl_scaf_47073-0.8
Bpl_scaf_47080-0.4EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN
Bpl_scaf_47080-1.4SERINE/THREONINE-PROTEIN KINASE RIO1
Bpl_scaf_47080-1.5CALCYPHOSIN
Bpl_scaf_47080-4.11
Bpl_scaf_47080-4.12
Bpl_scaf_47080-4.7FMRFAMIDE RECEPTOR-RELATED
Bpl_scaf_47080-5.10
Bpl_scaf_47080-5.11
Bpl_scaf_47080-5.12
Bpl_scaf_47085-0.16
Bpl_scaf_47085-0.2ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_47085-0.9
Bpl_scaf_47100-0.3SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT
Bpl_scaf_47111-0.5ZGC:195170
Bpl_scaf_47133-0.19
Bpl_scaf_47133-0.21
Bpl_scaf_47133-0.22PLEXIN
Bpl_scaf_47133-0.25
Bpl_scaf_47144-0.5
Bpl_scaf_47144-0.7
Bpl_scaf_47160-0.4
Bpl_scaf_47160-0.7GM2 GANGLIOSIDE ACTIVATOR PROTEIN
Bpl_scaf_47185-0.0
Bpl_scaf_47185-0.12
Bpl_scaf_47185-0.19
Bpl_scaf_47185-0.4DNA HELICASE RECQ FAMILY MEMBER
Bpl_scaf_47185-0.6
Bpl_scaf_47200-0.7DEP DOMAIN CONTAINING PROTEIN 5
Bpl_scaf_47215-0.1
Bpl_scaf_4723-0.0
Bpl_scaf_4723-0.18
Bpl_scaf_4723-0.19TYROSINE-PROTEIN KINASE RECEPTOR
Bpl_scaf_4723-0.20
Bpl_scaf_4723-0.23APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Bpl_scaf_4723-0.24
Bpl_scaf_47232-0.5MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_47243-0.1
Bpl_scaf_47243-0.3SGNH_HYDRO DOMAIN-CONTAINING PROTEIN
Bpl_scaf_47243-0.4BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_47253-0.0
Bpl_scaf_47253-0.6REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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