About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_46837-2.9
Bpl_scaf_46838-0.0
Bpl_scaf_46838-0.11
Bpl_scaf_46838-0.9PROTEIN CBG15099
Bpl_scaf_46838-1.15
Bpl_scaf_46838-1.16
Bpl_scaf_46838-1.17
Bpl_scaf_46838-1.18RIBOSOMAL PROTEIN S6 KINASE
Bpl_scaf_46838-2.5U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11
Bpl_scaf_46838-2.6PERIODIC TRYPTOPHAN PROTEIN 1
Bpl_scaf_46838-3.20PROTEIN CBG22215
Bpl_scaf_46838-3.6IP21249P
Bpl_scaf_46838-3.7IP21249P
Bpl_scaf_46838-3.8AT-RICH INTERACTIVE DOMAIN-CONTAINING PROTEIN 2
Bpl_scaf_46838-4.10IP21249P
Bpl_scaf_46838-4.43
Bpl_scaf_46838-4.45MOLTING PROTEIN MLT-4
Bpl_scaf_46838-4.46NUCLEOPORIN NUP43
Bpl_scaf_46838-4.5IP21249P
Bpl_scaf_46838-4.8IP21249P
Bpl_scaf_46838-4.9IP21249P
Bpl_scaf_46838-5.1228S RIBOSOMAL PROTEIN S15, MITOCHONDRIAL
Bpl_scaf_46838-5.7
Bpl_scaf_46838-5.8SYNAPTIC VESICLE GLYCOPROTEIN 2
Bpl_scaf_46838-6.16PARKIN COREGULATED GENE PROTEIN PARK2 COREGULATED
Bpl_scaf_46838-6.17CYSTEINE PROTEASE FAMILY C1-RELATED
Bpl_scaf_46838-6.23
Bpl_scaf_46838-6.38CYSTEINE PROTEASE FAMILY C1-RELATED
Bpl_scaf_46838-6.40CYSTEINE PROTEASE FAMILY C1-RELATED
Bpl_scaf_46838-6.41
Bpl_scaf_46839-0.0
Bpl_scaf_46840-0.5
Bpl_scaf_46841-0.3AGAP005574-PA
Bpl_scaf_46846-0.3
Bpl_scaf_46848-1.174-NITROPHENYLPHOSPHATASE-RELATED
Bpl_scaf_46848-1.6BETA-HEXOSAMINIDASE
Bpl_scaf_46848-3.3
Bpl_scaf_46849-0.0
Bpl_scaf_46853-0.0
Bpl_scaf_46854-0.0
Bpl_scaf_46855-0.0
Bpl_scaf_46856-0.1
Bpl_scaf_46857-0.10RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
Bpl_scaf_46857-0.8GALACTOSIDE 2-L-FUCOSYLTRANSFERASE
Bpl_scaf_46857-1.0
Bpl_scaf_46857-1.8
Bpl_scaf_46857-2.1UNCHARACTERIZED
Bpl_scaf_46857-2.12BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_46857-2.2ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Bpl_scaf_46857-2.3ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
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