About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_4648-0.6
Bpl_scaf_4648-0.8UNCHARACTERIZED
Bpl_scaf_4648-0.9MARGINAL ZONE B- AND B1-CELL-SPECIFIC PROTEIN
Bpl_scaf_46480-0.4CALCYPHOSIN
Bpl_scaf_46480-0.44DNA-BINDING PROTEIN INHIBITOR
Bpl_scaf_46480-0.46ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Bpl_scaf_46480-0.47F-BOX ONLY PROTEIN 33
Bpl_scaf_46480-0.7PEPTIDYL-PROLYL CIS-TRANS ISOMERASE
Bpl_scaf_46487-0.7GTPASE, IMAP FAMILY MEMBER-RELATED
Bpl_scaf_46488-0.0
Bpl_scaf_46488-1.12STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
Bpl_scaf_46488-1.46DNA REPLICATION COMPLEX GINS PROTEIN PSF2
Bpl_scaf_46488-1.48CARBOXYLESTERASE
Bpl_scaf_46488-1.8TYROSINASE FAMILY MEMBER
Bpl_scaf_46488-1.9CARBOXYLESTERASE
Bpl_scaf_46488-2.7
Bpl_scaf_46488-2.8PEPTIDASE S8
Bpl_scaf_46488-3.6AQUAPORIN TRANSPORTER
Bpl_scaf_46488-3.8TRANSPORT PROTEIN TRAPP
Bpl_scaf_46488-4.12CALPONIN
Bpl_scaf_46488-4.14UNCHARACTERIZED
Bpl_scaf_46488-5.31STEROID 17-ALPHA-HYDROXYLASE/17,20 LYASE
Bpl_scaf_46488-5.5CALPONIN
Bpl_scaf_46488-6.17P53 INDUCED PROTEIN
Bpl_scaf_46488-6.21
Bpl_scaf_46488-6.22RNA LARIAT DEBRANCHING ENZYME
Bpl_scaf_46488-6.23
Bpl_scaf_46488-6.24
Bpl_scaf_46488-6.3440S RIBOSOMAL PROTEIN S25
Bpl_scaf_46488-6.36HOMEO BOX HB9 LIKE A-RELATED
Bpl_scaf_46497-0.17ASPARAGINE SYNTHETASE
Bpl_scaf_46497-0.28METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED
Bpl_scaf_46497-0.29METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED
Bpl_scaf_46497-0.30METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED
Bpl_scaf_46497-0.31
Bpl_scaf_46497-0.32CHITINASE
Bpl_scaf_46497-0.7MITOCHONDRIAL IMPORT RECEPTOR SUBUNIT TOM7 HOMOLOG
Bpl_scaf_46507-0.1
Bpl_scaf_46507-0.22
Bpl_scaf_46507-0.23TUBULIN
Bpl_scaf_46507-0.25ATP-DEPENDENT DNA HELICASE
Bpl_scaf_46507-0.4
Bpl_scaf_46507-0.5
Bpl_scaf_46524-0.7THAP4 PROTEIN
Bpl_scaf_46524-0.9DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
Bpl_scaf_46533-0.20FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_46533-0.21
Bpl_scaf_46533-0.6
Bpl_scaf_46541-0.44PLEXIN
Bpl_scaf_46541-0.45PLEXIN
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