About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_46068-0.6
Bpl_scaf_46068-0.7
Bpl_scaf_46068-0.9CADHERIN-87A
Bpl_scaf_4608-0.5SD08549P
Bpl_scaf_4608-0.7
Bpl_scaf_46122-0.0
Bpl_scaf_46135-0.5LEUCINE-RICH PPR MOTIF-CONTAINING PROTEIN, MITOCHONDRIAL
Bpl_scaf_46145-0.14AMILORIDE-SENSITIVE SODIUM CHANNEL-RELATED
Bpl_scaf_46145-0.4CEREBELLIN-RELATED
Bpl_scaf_46145-0.5
Bpl_scaf_4615-0.1CEREBELLIN-RELATED
Bpl_scaf_4615-0.18CEREBELLIN-RELATED
Bpl_scaf_4615-0.19CEREBELLIN-RELATED
Bpl_scaf_4615-0.2CEREBELLIN-RELATED
Bpl_scaf_4615-0.4CEREBELLIN-RELATED
Bpl_scaf_4615-0.5CEREBELLIN-RELATED
Bpl_scaf_46161-0.14
Bpl_scaf_46161-0.4
Bpl_scaf_46161-0.8
Bpl_scaf_46161-0.9-
Bpl_scaf_46173-0.0
Bpl_scaf_46173-0.1
Bpl_scaf_46173-0.5
Bpl_scaf_46173-0.8SERINE-THREONINE PROTEIN KINASE
Bpl_scaf_46186-0.3DUF3504 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_46197-0.6ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
Bpl_scaf_46197-0.7
Bpl_scaf_46199-0.1
Bpl_scaf_46206-0.13CELL FATE DETERMINING PROTEIN MAB21-RELATED
Bpl_scaf_46207-1.3UNCHARACTERIZED
Bpl_scaf_46207-2.10GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE
Bpl_scaf_46207-3.1BETA-AMYLOID BINDING PROTEIN-RELATED
Bpl_scaf_46207-3.5UNCHARACTERIZED
Bpl_scaf_46207-4.14RIBONUCLEASE H2 SUBUNIT A
Bpl_scaf_46207-4.2ANAPHASE-PROMOTING COMPLEX SUBUNIT 5
Bpl_scaf_46207-4.24GOLGIN SUBFAMILY A MEMBER-RELATED
Bpl_scaf_46207-4.26SI:CH1073-475A24.1
Bpl_scaf_46207-4.43ANAPHASE-PROMOTING COMPLEX SUBUNIT 5
Bpl_scaf_46207-4.44
Bpl_scaf_46207-4.45DNA POLYMERASE EPSILON SUBUNIT 3
Bpl_scaf_46207-4.46AGAP005574-PA
Bpl_scaf_46207-4.47DIMETHYLANILINE MONOOXYGENASE
Bpl_scaf_46207-4.49CASEIN KINASE II SUBUNIT BETA
Bpl_scaf_46207-4.7
Bpl_scaf_46232-0.4AGAP000321-PA
Bpl_scaf_46248-0.0
Bpl_scaf_46249-0.5TUDOR DOMAIN CONTAINING PROTEIN
Bpl_scaf_46249-0.6
Bpl_scaf_46249-0.9UNCHARACTERIZED
Bpl_scaf_46249-1.1RNA BINDING PROTEIN
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