About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_4565-1.12SIT4 YEAST -ASSOCIATING PROTEIN-RELATED
Bpl_scaf_4565-1.5UNCHARACTERIZED
Bpl_scaf_4565-2.4
Bpl_scaf_4565-3.7
Bpl_scaf_4565-3.8
Bpl_scaf_4565-4.2PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_4565-5.10UNCHARACTERIZED
Bpl_scaf_4565-5.9UNCHARACTERIZED
Bpl_scaf_45661-0.350S RIBOSOMAL PROTEIN L21
Bpl_scaf_45671-0.0
Bpl_scaf_45671-0.11
Bpl_scaf_45671-0.9
Bpl_scaf_45679-0.1G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_45679-0.7G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_45687-0.12
Bpl_scaf_457-0.10
Bpl_scaf_457-0.9UNCHARACTERIZED
Bpl_scaf_45701-0.0
Bpl_scaf_45701-0.1
Bpl_scaf_45721-0.12THIOESTERASE
Bpl_scaf_45721-0.13THAP DOMAIN-CONTAINING
Bpl_scaf_45731-0.13
Bpl_scaf_45731-0.7
Bpl_scaf_45731-1.11
Bpl_scaf_45731-1.12
Bpl_scaf_45731-3.11
Bpl_scaf_45731-3.14
Bpl_scaf_45731-3.4
Bpl_scaf_45731-4.2
Bpl_scaf_45731-5.13MOLTING PROTEIN MLT-4
Bpl_scaf_45731-5.14ANKYRIN REPEAT PROTEIN
Bpl_scaf_45731-6.11
Bpl_scaf_45731-6.18ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
Bpl_scaf_45731-6.19
Bpl_scaf_45731-6.2
Bpl_scaf_45750-0.1
Bpl_scaf_45750-0.11TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_45750-0.14
Bpl_scaf_45750-0.15GLYCOGENIN SUBFAMILY MEMBER
Bpl_scaf_45750-0.6GAMMA TUBULIN COMPLEX PROTEIN
Bpl_scaf_45762-0.11SUPPRESSOR OF TY 5
Bpl_scaf_45762-0.12PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED
Bpl_scaf_45762-0.13NUCLEAR HORMONE RECEPTOR HR3-RELATED
Bpl_scaf_45762-0.8
Bpl_scaf_45777-0.4MYOSUPPRESSIN RECEPTOR 1, ISOFORM B-RELATED
Bpl_scaf_45793-0.10BCL-2 RELATED
Bpl_scaf_45793-0.12MANNOSE-6-PHOSPHATE RECEPTOR FAMILY MEMBER
Bpl_scaf_45793-0.14CELL DIVISION PROTEIN KINASE
Bpl_scaf_45793-0.21BCL-2 RELATED
Bpl_scaf_45793-0.9S-ADENOSYLMETHIONINE DECARBOXYLASE
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