About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_45392-4.12GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE BETA-1,3-GLUCURONYLTRANSFERASE
Bpl_scaf_45392-4.2LD33804P
Bpl_scaf_45392-4.26NUCLEAR HORMONE RECEPTOR
Bpl_scaf_45392-4.28
Bpl_scaf_45392-4.9
Bpl_scaf_45403-0.5CRUMBS FAMILY MEMBER
Bpl_scaf_45425-0.1KELCH PROTEIN
Bpl_scaf_45449-0.4
Bpl_scaf_45464-0.4
Bpl_scaf_45472-0.3ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_45472-0.4ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_45472-0.9N-ACETYLNEURAMINATE 9-O-ACETYLTRANSFERASE
Bpl_scaf_45479-0.660S RIBOSOMAL PROTEIN L37A
Bpl_scaf_4550-0.10
Bpl_scaf_4550-0.17AQUAPORIN TRANSPORTER
Bpl_scaf_4550-0.4AQUAPORIN TRANSPORTER
Bpl_scaf_4550-0.5AQUAPORIN TRANSPORTER
Bpl_scaf_45534-0.0
Bpl_scaf_45534-0.10
Bpl_scaf_45534-0.9
Bpl_scaf_45534-10.0CT120 PROTEIN
Bpl_scaf_45534-10.1
Bpl_scaf_45534-10.4CT120 PROTEIN
Bpl_scaf_45534-11.2
Bpl_scaf_45534-12.11
Bpl_scaf_45534-12.13
Bpl_scaf_45534-2.0ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_45534-3.10NUCLEOLAR GTP-BINDING PROTEIN 1
Bpl_scaf_45534-3.11
Bpl_scaf_45534-3.9
Bpl_scaf_45534-4.5PR DOMAIN ZINC FINGER PROTEIN
Bpl_scaf_45534-4.8VACUOLAR PROTON ATPASES
Bpl_scaf_45534-5.5
Bpl_scaf_45534-8.05-HYDROXYTRYPTAMINE RECEPTOR
Bpl_scaf_4555-0.3
Bpl_scaf_4555-0.5
Bpl_scaf_4555-0.8OVOCHYMASE-RELATED
Bpl_scaf_45571-0.10ATP-DEPENDENT DNA HELICASE
Bpl_scaf_45571-0.9
Bpl_scaf_45586-0.0
Bpl_scaf_45587-0.12
Bpl_scaf_45587-0.14
Bpl_scaf_45587-0.15RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
Bpl_scaf_45587-1.0RAD, GEM/KIR FAMILY MEMBER 2, ISOFORM C
Bpl_scaf_45587-1.2KRAB AND ZINC FINGER DOMAIN-CONTAINING
Bpl_scaf_45587-2.17TYROSINASE FAMILY MEMBER
Bpl_scaf_45587-2.35CEREBELLIN-RELATED
Bpl_scaf_45587-2.36CEREBELLIN-RELATED
Bpl_scaf_45587-2.39TYROSINASE FAMILY MEMBER
Bpl_scaf_45587-2.8CEREBELLIN-RELATED
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