About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_45229-1.19
Bpl_scaf_45229-1.20SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION
Bpl_scaf_45229-2.5
Bpl_scaf_45229-2.6CALCIUM BINDING PROTEIN
Bpl_scaf_45236-0.2
Bpl_scaf_45239-0.11
Bpl_scaf_45239-0.6
Bpl_scaf_45239-1.1
Bpl_scaf_45239-1.10ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
Bpl_scaf_45239-1.21FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_45239-1.23
Bpl_scaf_45239-1.27
Bpl_scaf_45239-1.9
Bpl_scaf_45239-2.0
Bpl_scaf_45239-2.1
Bpl_scaf_45239-2.16
Bpl_scaf_45239-2.17
Bpl_scaf_45239-2.18
Bpl_scaf_45239-2.3
Bpl_scaf_45239-2.6
Bpl_scaf_45239-2.7
Bpl_scaf_45250-0.2ELECTRON TRANSFER FLAVOPROTEIN-UBIQUINONE OXIDOREDUCTASE
Bpl_scaf_45250-2.2FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_45250-2.21
Bpl_scaf_45250-2.5FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Bpl_scaf_45250-3.4INO80 COMPLEX SUBUNIT B
Bpl_scaf_45250-3.5CT120 PROTEIN
Bpl_scaf_4526-0.6IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_4530-0.16NAD-DEPENDENT PROTEIN DEACYLASE SIRTUIN-5, MITOCHONDRIAL-RELATED
Bpl_scaf_4530-0.17DELTEX-RELATED
Bpl_scaf_4530-0.5
Bpl_scaf_45345-0.2
Bpl_scaf_45345-1.13
Bpl_scaf_45345-1.18
Bpl_scaf_45345-11.3RH59310P
Bpl_scaf_45345-12.5DBX
Bpl_scaf_45345-13.15RAS-ASSOCIATING DOMAIN CONTAINING PROTEIN
Bpl_scaf_45345-13.7ALDO/KETO REDUCTASE
Bpl_scaf_45345-13.9ALDEHYDE DEHYDROGENASE
Bpl_scaf_45345-2.12
Bpl_scaf_45345-3.11CEREBELLIN-RELATED
Bpl_scaf_45345-3.12
Bpl_scaf_45345-3.15LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34
Bpl_scaf_45345-3.37
Bpl_scaf_45345-4.8F-ACTIN-CAPPING PROTEIN SUBUNIT BETA
Bpl_scaf_45345-4.9RIBOSOMAL PROTEIN S6 KINASE
Bpl_scaf_45345-5.10ABC TRANSPORTER B FAMILY
Bpl_scaf_45345-5.11ATP-BINDING CASSETTE SUB-FAMILY B
Bpl_scaf_45345-5.39
Bpl_scaf_45345-7.5
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