About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_44756-0.4
Bpl_scaf_44756-0.5
Bpl_scaf_44768-0.3IMPORTIN ALPHA
Bpl_scaf_44768-0.4SERINE/THREONINE-PROTEIN KINASE TAO
Bpl_scaf_44768-1.12JITTERBUG, ISOFORM N
Bpl_scaf_44768-1.23PHOSPHOLIPID SCRAMBLASE-RELATED
Bpl_scaf_44768-1.5UNCHARACTERIZED
Bpl_scaf_44768-1.6-
Bpl_scaf_44768-2.13
Bpl_scaf_44768-2.3GH08155P
Bpl_scaf_44768-2.8
Bpl_scaf_44768-2.9AGAP008170-PA
Bpl_scaf_44768-3.11
Bpl_scaf_44768-3.12TUMOR NECROSIS FACTOR FAMILY MEMBER
Bpl_scaf_44768-3.8
Bpl_scaf_44768-4.17AMINE OXIDASE
Bpl_scaf_44768-4.19MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED
Bpl_scaf_44768-4.27PROTEIN EIGER
Bpl_scaf_44768-4.29KELCH PROTEIN
Bpl_scaf_44769-0.1TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
Bpl_scaf_44769-0.4-
Bpl_scaf_44777-0.0
Bpl_scaf_448-0.27
Bpl_scaf_448-0.28CADHERIN-87A
Bpl_scaf_448-0.29CADHERIN-87A
Bpl_scaf_44807-0.5
Bpl_scaf_44813-0.8
Bpl_scaf_44822-0.0
Bpl_scaf_44822-0.3
Bpl_scaf_44831-0.0BEN DOMAIN-CONTAINING PROTEIN 3
Bpl_scaf_44832-0.0F-BOX DOMAIN CONTAINING PROTEIN, EXPRESSED
Bpl_scaf_44832-1.3
Bpl_scaf_44832-2.1
Bpl_scaf_44832-3.6SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1
Bpl_scaf_44832-4.1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_44832-4.6
Bpl_scaf_44832-5.10BRIDGING INTEGRATOR 3
Bpl_scaf_44837-0.1
Bpl_scaf_44837-0.4U3 SMALL NUCLEOLAR RNA U3 SNORNA ASSOCIATED PROTEIN
Bpl_scaf_4485-0.0L1 TRANSPOSABLE ELEMENT-RELATED
Bpl_scaf_44851-0.5CALSYNTENIN
Bpl_scaf_44871-0.13BONUS, ISOFORM C-RELATED
Bpl_scaf_44871-0.3
Bpl_scaf_44871-0.5BONUS, ISOFORM C-RELATED
Bpl_scaf_44876-0.8
Bpl_scaf_44885-0.6PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
Bpl_scaf_44885-0.7
Bpl_scaf_44886-0.14
Bpl_scaf_44886-0.17APICAL ENDOSOMAL GLYCOPROTEIN PRECURSOR.
Bpl_scaf_44895-0.8
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