About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_45124-0.16S-ADENOSYLMETHIONINE SYNTHETASE
Bpl_scaf_45124-0.17EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED
Bpl_scaf_45124-0.33UPF0561 PROTEIN C2ORF68
Bpl_scaf_45124-0.37EUKARYOTIC TRANSLATION INITIATION FACTOR 2C
Bpl_scaf_45129-0.0
Bpl_scaf_45129-0.1
Bpl_scaf_45129-0.17BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_45129-0.2
Bpl_scaf_45129-0.4
Bpl_scaf_45129-1.0
Bpl_scaf_45129-1.1BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_45129-1.13
Bpl_scaf_45129-1.2ALPHA-(1,3)-FUCOSYLTRANSFERASE C-RELATED
Bpl_scaf_45148-1.3LD44762P
Bpl_scaf_4515-0.0APPLE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_4515-0.8
Bpl_scaf_4516-2.6ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER
Bpl_scaf_4516-3.11
Bpl_scaf_4516-3.12UNCHARACTERIZED
Bpl_scaf_4516-3.7UNCHARACTERIZED
Bpl_scaf_4516-3.9EGF-LIKE-DOMAIN, MULTIPLE 7, 8
Bpl_scaf_4516-4.0
Bpl_scaf_4516-4.16
Bpl_scaf_4516-4.17
Bpl_scaf_4516-4.18TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II
Bpl_scaf_45163-1.25
Bpl_scaf_45163-1.27
Bpl_scaf_45163-1.7AGAP009604-PA
Bpl_scaf_45163-1.8PUTATIVE-RELATED
Bpl_scaf_45171-0.1
Bpl_scaf_45177-0.2SOLUTE CARRIER FAMILY 22 MEMBER
Bpl_scaf_45177-1.0
Bpl_scaf_45177-1.11
Bpl_scaf_45177-1.3XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER
Bpl_scaf_45177-1.4
Bpl_scaf_45178-0.5APPLE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_45183-0.22FLAVIN MONOAMINE OXIDASE
Bpl_scaf_45183-0.6
Bpl_scaf_45183-0.8ACYL-COA DESATURASE
Bpl_scaf_45183-1.5CHITINASE
Bpl_scaf_45183-10.17DRAB11-RELATED
Bpl_scaf_45183-10.18FORKHEAD BOX PROTEIN J1
Bpl_scaf_45183-10.4ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_45183-10.6
Bpl_scaf_45183-11.3
Bpl_scaf_45183-11.5
Bpl_scaf_45183-11.6
Bpl_scaf_45183-12.13IONOTROPIC GLUTAMATE RECEPTOR
Bpl_scaf_45183-12.6NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
Bpl_scaf_45183-13.0
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