About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_45-1.10GALACTOSE-1-PHOSPHATE URIDYLYLTRANSFERASE
Bpl_scaf_45-1.8CYCLINS
Bpl_scaf_45-1.9
Bpl_scaf_45-2.2FMRFAMIDE RECEPTOR-RELATED
Bpl_scaf_45-3.0
Bpl_scaf_4500-0.19DED DOMAIN-CONTAINING PROTEIN
Bpl_scaf_4500-0.20DED DOMAIN-CONTAINING PROTEIN
Bpl_scaf_45017-0.11
Bpl_scaf_45017-0.4
Bpl_scaf_45017-0.5
Bpl_scaf_45017-0.7
Bpl_scaf_45043-0.3RCG26366
Bpl_scaf_45043-0.8RING/U-BOX SUPERFAMILY PROTEIN
Bpl_scaf_45043-0.9RCG26366
Bpl_scaf_4505-0.9REGULATORY-ASSOCIATED PROTEIN OF MTOR
Bpl_scaf_45056-0.17
Bpl_scaf_45056-0.18ACTIN
Bpl_scaf_45056-0.19ACTIN
Bpl_scaf_45056-0.63
Bpl_scaf_45056-0.64
Bpl_scaf_45056-0.65COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING
Bpl_scaf_45067-0.2
Bpl_scaf_45083-0.1
Bpl_scaf_45083-0.18
Bpl_scaf_45083-0.3
Bpl_scaf_45097-0.18BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_45097-0.20BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_45097-0.21BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_45097-0.34
Bpl_scaf_45097-0.35
Bpl_scaf_45097-0.36
Bpl_scaf_45097-0.38BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE
Bpl_scaf_45097-0.39
Bpl_scaf_45097-0.7
Bpl_scaf_45097-0.8
Bpl_scaf_45097-0.9
Bpl_scaf_45107-0.16
Bpl_scaf_45107-0.17
Bpl_scaf_45107-0.18
Bpl_scaf_45107-0.19ANKYRIN REPEAT-CONTAINING
Bpl_scaf_45107-0.3
Bpl_scaf_45107-0.44ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATED
Bpl_scaf_45114-0.19GLUTATHIONE PEROXIDASE
Bpl_scaf_45114-0.27IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_45114-0.43SIDESTEP PROTEIN
Bpl_scaf_45114-0.44SET AND MYND DOMAIN-CONTAINING PROTEIN 5
Bpl_scaf_45115-0.15MAMMARY TURMOR VIRUS RECEPTOR HOMOLOG 1, 2 MTVR1, 2
Bpl_scaf_45115-0.16
Bpl_scaf_45115-0.17
Bpl_scaf_45124-0.15UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
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