About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_44428-3.60
Bpl_scaf_44428-3.61TRANSCRIPTIONAL REPRESSOR CTCFL-RELATED
Bpl_scaf_44428-3.62
Bpl_scaf_44428-3.7
Bpl_scaf_44428-4.13DUF3504 DOMAIN-CONTAINING PROTEIN
Bpl_scaf_44428-4.8
Bpl_scaf_44428-4.9
Bpl_scaf_44428-5.3SOLUTE CARRIER FAMILY 39
Bpl_scaf_44428-5.8
Bpl_scaf_44428-6.12N-ACETYLTRANSFERASE 10
Bpl_scaf_44428-6.13BETA TRANSDUCIN-RELATED PROTEIN
Bpl_scaf_44428-7.10DEUBIQUITINATING PROTEIN VCIP135
Bpl_scaf_44428-7.8RETICULOCALBIN
Bpl_scaf_44428-7.9PROTEIN PHOSPHATASE INHIBITOR
Bpl_scaf_44429-0.17TANDEM PH DOMAIN CONTAINING PROTEIN
Bpl_scaf_44429-0.9SODIUM/POTASSIUM/CALCIUM EXCHANGER
Bpl_scaf_44429-1.5
Bpl_scaf_44429-1.7PROTEIN KINASE C, MU
Bpl_scaf_44438-0.4
Bpl_scaf_44438-1.2
Bpl_scaf_44438-1.7GALACTOCEREBROSIDASE
Bpl_scaf_44438-1.8CHAPERONIN
Bpl_scaf_44448-0.3MICROSPHERULE PROTEIN 1
Bpl_scaf_44448-1.6DNAJ HOMOLOG SUBFAMILY B MEMBER 11
Bpl_scaf_44455-0.5ANKYRIN REPEAT FAMILY PROTEIN
Bpl_scaf_44455-0.6SORTING NEXIN
Bpl_scaf_44455-1.26
Bpl_scaf_44455-1.27
Bpl_scaf_44455-1.29IDURONATE 2-SULFATASE
Bpl_scaf_44455-1.35
Bpl_scaf_44458-0.2
Bpl_scaf_44464-0.12
Bpl_scaf_44464-0.13
Bpl_scaf_44464-0.5
Bpl_scaf_44464-1.0
Bpl_scaf_44464-1.8
Bpl_scaf_44465-0.5SPOT14 FAMILY MEMBER
Bpl_scaf_44465-0.52ACTIN
Bpl_scaf_44465-0.53ACTIN
Bpl_scaf_44465-1.14LIM DOMAIN-CONTAINING PROTEIN
Bpl_scaf_44465-1.24
Bpl_scaf_44465-1.26TOLL-LIKE RECEPTOR
Bpl_scaf_44474-0.1
Bpl_scaf_44474-0.3SI:CH211-108C17.2-RELATED-RELATED
Bpl_scaf_44474-1.19
Bpl_scaf_44474-1.2
Bpl_scaf_44474-1.22
Bpl_scaf_44474-1.23IG-LIKE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_44475-1.0
Bpl_scaf_44475-2.4BLR2807 PROTEIN
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