About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_43985-0.10CBP/P300-RELATED
Bpl_scaf_43986-0.2CRUMBS FAMILY MEMBER
Bpl_scaf_43987-0.11STIMULATOR OF INTERFERON GENES PROTEIN
Bpl_scaf_43988-0.3
Bpl_scaf_43993-0.1VACUOLAR ATP SYNTHASE SUBUNIT G
Bpl_scaf_43993-1.2360 KDA RIBONUCLEOPROTEIN SSA/RO
Bpl_scaf_43993-1.24DYNAMIN
Bpl_scaf_43993-1.25MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_43993-3.17
Bpl_scaf_43993-3.18
Bpl_scaf_43993-3.19
Bpl_scaf_44020-0.10INTERFERON-RELATED DEVELOPMENTAL REGULATOR
Bpl_scaf_44020-0.9INTERFERON-RELATED DEVELOPMENTAL REGULATOR
Bpl_scaf_44020-1.0YALI0E30327P
Bpl_scaf_44020-1.7HAUS AUGMIN-LIKE COMPLEX SUBUNIT 7
Bpl_scaf_44020-1.9BATTENIN
Bpl_scaf_44020-2.13N-TERMINAL ACETYLTRANSFERASE
Bpl_scaf_44020-2.19
Bpl_scaf_44020-2.4
Bpl_scaf_44020-2.8
Bpl_scaf_44020-3.14BICAUDAL D FAMILY MEMBER
Bpl_scaf_44020-4.12PROTEIN BRICK1
Bpl_scaf_44020-4.5RENTINAL DEGENERATION 3-LIKE
Bpl_scaf_44020-4.6
Bpl_scaf_44020-4.7PHD/F-BOX CONTAINING PROTEIN
Bpl_scaf_44021-0.6CRUMBS FAMILY MEMBER
Bpl_scaf_44032-0.1RIBOSOMAL PROTEIN L13
Bpl_scaf_44047-0.0
Bpl_scaf_44065-0.3BONUS, ISOFORM C-RELATED
Bpl_scaf_4407-0.10REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Bpl_scaf_44089-0.10
Bpl_scaf_44089-0.12NEPHRIN
Bpl_scaf_44089-0.9
Bpl_scaf_44118-0.17CALCIUM-BINDING PROTEIN 8-RELATED
Bpl_scaf_44118-0.7MYOSIN REGULATORY LIGHT CHAIN 2
Bpl_scaf_44118-1.7METAXIN RELATED
Bpl_scaf_44118-2.6
Bpl_scaf_44118-3.15MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_44118-3.16MONOCARBOXYLATE TRANSPORTER
Bpl_scaf_44118-3.17SIMILAR TO RIKEN CDNA E130308A19
Bpl_scaf_44118-3.18
Bpl_scaf_44118-4.11CADHERIN-87A
Bpl_scaf_44118-4.17CADHERIN-23
Bpl_scaf_44118-4.18DESMOGLEIN FAMILY MEMBER
Bpl_scaf_44118-4.5
Bpl_scaf_44131-0.4
Bpl_scaf_44146-0.16
Bpl_scaf_44146-0.17SH3 ADAPTER PROTEIN SPIN90 NCK INTERACTING PROTEIN WITH SH3 DOMAIN
Bpl_scaf_44146-0.7
Bpl_scaf_44166-0.0LIPOPOLYSACCHARIDE-INDUCED TUMOR NECROSIS FACTOR-ALPHA FACTOR
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